Evidence map›Paper›PMID 12202597›Full record

ArticleJournal of clinical microbiology2002

Evaluation of genotype and LiPA MYCOBACTERIA assays for identification of Finnish mycobacterial isolates.

Johanna Mäkinen, Aleksi Sarkola, Merja Marjamäki, Matti K Viljanen, Hanna Soini

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Misidentification ofJournal of clinical tuberculosis and other mycobacterial diseases · 2021
    Article
  4. Epidemiology of nontuberculous mycobacteria among patients with cystic fibrosis in Scandinavia.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2015
    Observational
  5. Article
  6. Article
  7. Article
  8. Evaluation of INNO-LiPA mycobacteria v2 assay for identification of rapidly growing mycobacteria.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2011
    Article
  9. Article
  10. Article
  11. Article
  12. Comparison of GenoType MTBC with RFLP-PCR and multiplex PCR to identify Mycobacterium tuberculosis complex species.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2007
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Prospective evaluation of the GenoType assay for routine identification of mycobacteria.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2004
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Johanna MäkinenNational Public Health Institute. Turku Graduate School of Biomedical Sciences Department of Medical Microbiology, University of Turku, Turku, Finland.
Aleksi Sarkola
Merja Marjamäki
Matti K Viljanen
Hanna Soini

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two DNA strip assays, INNO-LiPA MYCOBACTERIA and GenoType Mykobakterien, were evaluated for identification of 81 Finnish mycobacterial isolates. The LiPA assay correctly identified 89.4% of the 66 isolates studied, and the GenoType assay identified 95.1% of 81 isolates. The GenoType assay had a wider selection of species and less stringent temperature requirements.

Indexed as

DNA ProbesReagent Kits, DiagnosticReagent StripsBacterial Typing TechniquesDNA, BacterialFinlandGenotypeHumansMycobacteriumMycobacterium InfectionsNucleic Acid HybridizationPolymerase Chain ReactionDNA, BacterialDNA ProbesReagent Kits, DiagnosticReagent Strips

Identifiers

PMID12202597
PMCPMC130730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.