Evidence map›Paper›PMID 12202368›Full record

ArticleBiophysical journal2002

Regulation of nuclear pore complex conformation by IP(3) receptor activation.

David Moore-Nichols, Anne Arnott, Robert C Dunn

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Mitogen activated protein kinase at the nuclear pore complex.Journal of cellular and molecular medicine · 2011
    Article
  4. Review
  5. Hormonal regulation of nuclear permeability.The Journal of biological chemistry · 2007
    Article
  6. The nuclear envelope: form and reformation.Current opinion in cell biology · 2006
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

David Moore-NicholsDepartment of Chemistry, University of Kansas, Lawrence, Kansas 66045 USA.
Anne Arnott
Robert C Dunn
University of Kansas · US

Funding

CA2+ REGULATES STRUCTURE/FUNCTION OF PORE COMPLEXR01GM055290 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI STEHNO-BITTEL, LISA A · 1999 to 2003
$1.1M
NIGMS NIH HHS GM55290-01A2
6 · The paper itself

Abstract

In recent years, both the molecular architecture and functional dynamics of nuclear pore complexes (NPCs) have been revealed with increasing detail. These large, supramolecular assemblages of proteins form channels that span the nuclear envelope of cells, acting as crucial regulators of nuclear import and export. From the cytoplasmic face of the nuclear envelope, nuclear pore complexes exhibit an eightfold symmetric ring structure encompassing a central lumen. The lumen often appears occupied by an additional structure alternatively referred to as the central granule, nuclear transport complex, or nuclear plug. Previous studies have suggested that the central granule may play a role in mediating calcium-dependent regulation of diffusion across the nuclear envelope for intermediate sized molecules (10-40 kDa). Using atomic force microscopy to measure the surface topography of chemically fixed Xenopus laevis oocyte nuclear envelopes, we present measurements of the relative position of the central granule within the NPC lumen under a variety of conditions known to modify nuclear Ca(2+) stores. These measurements reveal a large, approximately 9-nm displacement of the central granule toward the cytoplasmic face of the nuclear envelope under calcium depleting conditions. Additionally, activation of nuclear inositol triphosphate (IP(3)) receptors by the specific agonist, adenophostin A, results in a concentration-dependent displacement of central granule position with an EC(50) of ~1.2 nM. The displacement of the central granule within the NPC is observed on both the cytoplasmic and nucleoplasmic faces of the nuclear envelope. The displacement is blocked upon treatment with xestospongin C, a specific inhibitor of IP(3) receptor activation. These results extend previous models of NPC conformational dynamics linking central granule position to depletion of IP(3) sensitive nuclear envelope calcium stores.

Indexed as

AdenosineAnimalsBiophysical PhenomenaBiophysicsCalciumCalcium Channel AgonistsCalcium ChannelsCell NucleusCytoplasmDose-Response Relationship, DrugInositol 1,4,5-Trisphosphate ReceptorsMicroscopy, Atomic ForceNuclear PoreOocytesProtein ConformationReceptors, Cytoplasmic and Nuclearadenophostin AAdenosineCalciumCalcium Channel AgonistsCalcium ChannelsInositol 1,4,5-Trisphosphate ReceptorsReceptors, Cytoplasmic and Nuclear

Identifiers

PMID12202368
PMCPMC1302241
OpenAlexW1988434306

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.