Evidence map›Paper›PMID 12198164›Full record

ArticleThe EMBO journal2002

TIS7 interacts with the mammalian SIN3 histone deacetylase complex in epithelial cells.

Ilja Vietor, Santhosh K Vadivelu, Nikolaus Wick, Robert Hoffman, Matt Cotten, Christian Seiser, Irene Fialka, Winfried Wunderlich, Astrid Haase, Gabriela Korinkova and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

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  10. Mechanisms of intestinal adaptation.Best practice & research. Clinical gastroenterology · 2016
    Review
  11. Article
  12. IFRD1 polymorphisms and gastric cancer risk in a Chinese population.Medical oncology (Northwood, London, England) · 2014
    Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Article
  19. IFRD1 is a candidate gene for SMNA on chromosome 7q22-q23.American journal of human genetics · 2009
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Ilja VietorIMP, Research Institute of Molecular Pathology, Dr Bohr-Gasse 7, A-1030 Vienna, Austria.
Santhosh K Vadivelu
Nikolaus Wick
Robert Hoffman
Matt Cotten
Christian Seiser
Irene Fialka
Winfried Wunderlich
Astrid Haase
Gabriela Korinkova
Gerald Brosch
Lukas A Huber
Research Institute of Molecular Pathology · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mammalian SIN3 complex consists of histone deacetylases (HDAC1, HDAC2), several known proteins (SAP30, N-CoR) and as yet unidentified proteins. Here we show that the mouse tetradecanoyl phorbol acetate induced sequence 7 (TIS7) protein is a novel transcriptional co-repressor that can associate with the SIN3 complex. We have identified tis7 as a gene that is up-regulated upon loss of polarity in a mouse mammary gland epithelial cell line expressing an estrogen-inducible c-JunER fusion protein. In unpolarized cells, TIS7 protein levels increase and TIS7 translocates into the nucleus. Overexpression of tis7 causes loss of polarity and represses a set of genes, as revealed by cDNA microarray analysis. We have shown that TIS7 protein interacts with several proteins of the SIN3 complex (mSin3B, HDAC1, N-CoR and SAP30) by yeast two-hybrid screening and co-immunoprecipitations. TIS7 co-immunoprecipitated HDAC complex is enzymatically active and represses a GAL4-dependent reporter transcription. The transcriptional repression of endogenous genes by tis7 overexpression is HDAC dependent. Thus, we propose TIS7 as a transcriptional co-repressor affecting the expression of specific genes in a HDAC activity-dependent manner during cell fate decisions, e.g. scattering.

Indexed as

Amino Acid SequenceAnimalsCell LineCell PolarityDNA, ComplementaryEpithelial CellsEstradiolFemaleGene Expression ProfilingHeLa CellsHistone Deacetylase 1Histone Deacetylase 2Histone DeacetylasesHumansImmediate-Early ProteinsMammary Glands, AnimalDNA, ComplementaryEstradiolHDAC1 protein, humanHdac2 protein, mouseHistone Deacetylase 1Histone Deacetylase 2Histone DeacetylasesIFRD1 protein, humanIfrd1 protein, mouseImmediate-Early ProteinsMembrane ProteinsMultienzyme ComplexesNCOR1 protein, humanNcor1 protein, mouseNuclear ProteinsNuclear Receptor Co-Repressor 1Proto-Oncogene Proteins c-junRecombinant Fusion ProteinsRepressor ProteinsSAP30 protein, humanSap30 protein, mouseSin3 Histone Deacetylase and Corepressor Complex

Identifiers

PMID12198164
PMCPMC125408
OpenAlexW2097293015

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.