ArticleGenetics2002
A genetic linkage map of the model legume Lotus japonicus and strategies for fast mapping of new loci.
Article in Genetics, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- Exploiting genetic and genomic resources to enhance productivity and abiotic stress adaptation of underutilized pulses.Frontiers in genetics · 2023Review
- A collection of novelFrontiers in plant science · 2023Article
- Distinct signaling routes mediate intercellular and intracellular rhizobial infection in Lotus japonicus.Plant physiology · 2021Article
- Mutants of Lotus japonicus deficient in flavonoid biosynthesis.Journal of plant research · 2021Article
- High-resolution genetic maps of Lotus japonicus and L. burttii based on re-sequencing of recombinant inbred lines.DNA research : an international journal for rapid publication of reports on genes and genomes · 2016Article
- A gene-based map of the Nod factor-independent Aeschynomene evenia sheds new light on the evolution of nodulation and legume genomes.DNA research : an international journal for rapid publication of reports on genes and genomes · 2016Article
- Article
- Naturally occurring diversity helps to reveal genes of adaptive importance in legumes.Frontiers in plant science · 2015Article
- Plant hormonal regulation of nitrogen-fixing nodule organogenesis.Molecules and cells · 2012Review
- A set of Lotus japonicus Gifu x Lotus burttii recombinant inbred lines facilitates map-based cloning and QTL mapping.DNA research : an international journal for rapid publication of reports on genes and genomes · 2012Article
- The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers.Journal of genetics · 2011Article
- A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes.BMC genomics · 2009Article
- A high-density linkage map of Lotus japonicus based on AFLP and SSR markers.DNA research : an international journal for rapid publication of reports on genes and genomes · 2008Article
- Genome structure of the legume, Lotus japonicus.DNA research : an international journal for rapid publication of reports on genes and genomes · 2008Article
- Individual and multi-environment combined analyses identify QTLs for morphogenetic and reproductive development traits in white clover (Trifolium repens L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006Article
- A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis.Proceedings of the National Academy of Sciences of the United States of America · 2006Article
- Significant microsynteny with new evolutionary highlights is detected between Arabidopsis and legume model plants despite the lack of macrosynteny.Molecular genetics and genomics : MGG · 2005Article
- The sulfate transporter SST1 is crucial for symbiotic nitrogen fixation in Lotus japonicus root nodules.The Plant cell · 2005Article
- Exploitation of colinear relationships between the genomes of Lotus japonicus, Pisum sativum and Arabidopsis thaliana, for positional cloning of a legume symbiosis gene.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2004Article
- Characteristics of the Lotus japonicus gene repertoire deduced from large-scale expressed sequence tag (EST) analysis.Plant molecular biology · 2004Article
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Authors and funding
13 authors.
Funding
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Abstract
A genetic map for the model legume Lotus japonicus has been developed. The F(2) mapping population was established from an interspecific cross between L. japonicus and L. filicaulis. A high level of DNA polymorphism between these parents was the source of markers for linkage analysis and the map is based on a framework of amplified fragment length polymorphism (AFLP) markers. Additional markers were generated by restriction fragment length polymorphism (RFLP) and sequence-specific PCR. A total of 524 AFLP markers, 3 RAPD markers, 39 gene-specific markers, 33 microsatellite markers, and six recessive symbiotic mutant loci were mapped. This genetic map consists of six linkage groups corresponding to the six chromosomes in L. japonicus. Fluorescent in situ hybridization (FISH) with selected markers aligned the linkage groups to chromosomes as described in the accompanying article by Pedrosa et al. 2002(this issue). The length of the linkage map is 367 cM and the average marker distance is 0.6 cM. Distorted segregation of markers was found in certain sections of the map and linkage group I could be assembled only by combining colormapping and cytogenetics (FISH). A fast method to position genetic loci employing three AFLP primer combinations yielding 89 markers was developed and evaluated by mapping three symbiotic loci, Ljsym1, Ljsym5, and Ljhar1-3.
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