Evidence map›Paper›PMID 12195015›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Modulation of TCR-induced transcriptional profiles by ligation of CD28, ICOS, and CTLA-4 receptors.

James L Riley, Mao Mao, Sumire Kobayashi, Matt Biery, Julja Burchard, Guy Cavet, Brian P Gregson, Carl H June, Peter S Linsley

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 129 papers.

0numbers the graph read from it
0cells of the map it votes in
129citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

129 citing papers in PubMed, 300 citations in OpenAlex.

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  13. Tumour-retained activated CCR7Nature communications · 2024
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  17. Modulation of T cell function and survival by the tumor microenvironment.Frontiers in cell and developmental biology · 2023
    Review
  18. Article
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  20. Review

69 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

James L RileyAbramson Family Cancer Research Institute and Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104-6160, USA. rileyj@mail.med.upenn.edu
Mao Mao
Sumire Kobayashi
Matt Biery
Julja Burchard
Guy Cavet
Brian P Gregson
Carl H June
Peter S Linsley
University of Pennsylvania · USCancer Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Signals generated by T cell receptor (TCR) and CD28 engagement are required for optimal T cell activation, but how these signals integrate within the cell is still largely unknown. We have used near genome-scale expression profiling to monitor T cell signal transduction pathways triggered via TCR and/or costimulatory receptors. Ligation of CD28 alone induced a set of short-lived early response transcripts in both Jurkat T cells and primary CD4 T cells, thus providing evidence that CD28 engagement can affect gene regulation independently of TCR engagement. Simultaneous signaling through both the TCR and CD28 resulted in altered expression of several thousand genes following several distinct temporal patterns. Most of these gene regulations were induced by TCR signaling alone and were augmented to varying degrees by CD28 costimulation. CD28 and ICOS costimulation had nearly identical effects on gene regulation, but a few transcripts (e.g., IL2, IL9) were significantly more affected by CD28. Therefore, the distinctive functional outcomes of costimulation via CD28 and ICOS are accompanied by relatively few distinct differences in gene expression. Cytotoxic T lymphocyte antigen 4 (CTLA-4) engagement selectively blocked augmentation of gene regulations by CD28-mediated costimulation, but did not ablate gene regulation induced by TCR triggering alone.

Indexed as

ImmunoconjugatesAbataceptAntigens, CDAntigens, DifferentiationAntigens, Differentiation, T-LymphocyteCD28 AntigensCTLA-4 AntigenGene Expression RegulationHumansInducible T-Cell Co-Stimulator ProteinJurkat CellsOligonucleotide Array Sequence AnalysisReceptors, Antigen, T-CellRNA, MessengerTranscription, GeneticAbataceptAntigens, CDAntigens, DifferentiationAntigens, Differentiation, T-LymphocyteCD28 AntigensCTLA-4 AntigenCTLA4 protein, humanICOS protein, humanImmunoconjugatesInducible T-Cell Co-Stimulator ProteinReceptors, Antigen, T-CellRNA, Messenger

Identifiers

PMID12195015
PMCPMC129347
OpenAlexW2029855686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.