Evidence map›Paper›PMID 12193659›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Cooperative activities of hematopoietic regulators recruit RNA polymerase II to a tissue-specific chromatin domain.

Kirby D Johnson, Jeffrey A Grass, Meghan E Boyer, Carol M Kiekhaefer, Gerd A Blobel, Mitchell J Weiss, Emery H Bresnick

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 115 citations in OpenAlex.

  1. Review
  2. Fine-Tuning of Cholesterol Homeostasis Controls Erythroid Differentiation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Article
  3. Article
  4. Article
  5. DNA·RNA triple helix formation can function as aProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Transcriptional mechanisms underlying hemoglobin synthesis.Cold Spring Harbor perspectives in medicine · 2013
    Review
  11. Evolution of hemoglobin and its genes.Cold Spring Harbor perspectives in medicine · 2012
    Article
  12. Enhancer and promoter interactions-long distance calls.Current opinion in genetics & development · 2012
    Review
  13. Article
  14. Article
  15. Article
  16. Bromodomain protein Brd3 associates with acetylated GATA1 to promote its chromatin occupancy at erythroid target genes.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  17. Article
  18. GATA switches as developmental drivers.The Journal of biological chemistry · 2010
    Review
  19. Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Kirby D JohnsonDepartment of Pharmacology, Molecular and Cellular Pharmacology Program, University of Wisconsin Medical School, 383 Medical Science Center, 1300 University Avenue, Madison, WI 53706, USA.
Jeffrey A Grass
Meghan E Boyer
Carol M Kiekhaefer
Gerd A Blobel
Mitchell J Weiss
Emery H Bresnick
Children's Hospital of Philadelphia · US

Funding

Transcriptional Control of Hemoglobin Synthesis and Erythrocyte DevelopmentR01DK050107 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Emery H. Bresnick · 1996 to 2026
$6.1M
Transcriptional Control of Hemoglobin SynthesisR37DK050107 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI BRESNICK, EMERY H · 2011 to 2020
$3.5M
COACTIVATORS THAT MEDIATE BETA GLOBIN LCR FUNCTIONR01DK055700 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI BRESNICK, EMERY H. · 1999 to 2006
$1.8M
NIDDK NIH HHS DK50107NIDDK NIH HHS DK55700NIDDK NIH HHS R01 DK050107NIDDK NIH HHS R01 DK055700NIDDK NIH HHS R37 DK050107
6 · The paper itself

Abstract

The hematopoietic transcription factor GATA-1 regulates erythropoiesis and beta-globin expression. Although consensus GATA-1 binding sites exist throughout the murine beta-globin locus, we found that GATA-1 discriminates among these sites in vivo. Conditional expression of GATA-1 in GATA-1-null cells recapitulated the occupancy pattern. GATA-1 induced RNA polymerase II (pol II) recruitment to subregions of the locus control region and to the beta-globin promoters. The hematopoietic factor NF-E2 cooperated with GATA-1 to recruit pol II to the promoters. We propose that only when GATA-1 attracts pol II to the locus control region can pol II access the promoter in a NF-E2-dependent manner.

Indexed as

AnimalsBone MarrowChromatinDNA-Binding ProteinsErythroid-Specific DNA-Binding FactorsGATA1 Transcription FactorGlobinsMiceNF-E2 Transcription FactorNF-E2 Transcription Factor, p45 SubunitPromoter Regions, GeneticRNA Polymerase IITranscription FactorsTumor Cells, CulturedChromatinDNA-Binding ProteinsErythroid-Specific DNA-Binding FactorsGata1 protein, mouseGATA1 Transcription FactorGlobinsNfe2 protein, mouseNF-E2 Transcription FactorNF-E2 Transcription Factor, p45 SubunitRNA Polymerase IITranscription Factors

Identifiers

PMID12193659
PMCPMC129342
OpenAlexW2002918903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.