Evidence map›Paper›PMID 12193636›Full record

ArticleJournal of bacteriology2002

Global expression profile of Bacillus subtilis grown in the presence of sulfate or methionine.

Sandrine Auger, Antoine Danchin, Isabelle Martin-Verstraete

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 56 citations in OpenAlex.

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  8. A dual control mechanism synchronizes riboflavin and sulphur metabolism in Bacillus subtilis.Proceedings of the National Academy of Sciences of the United States of America · 2015
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  15. Increased sulfate uptake by E. coli overexpressing the SLC26-related SulP protein Rv1739c from Mycobacterium tuberculosis.Comparative biochemistry and physiology. Part A, Molecular & integrative physiology · 2008
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Sandrine AugerUnité de Génétique des Génomes Bactériens, Institut Pasteur, URA CNRS 2171, 75724 Paris Cedex 15, France.
Antoine Danchin
Isabelle Martin-Verstraete
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FRUniversity of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA arrays were used to investigate the global transcriptional profile of Bacillus subtilis grown in the presence of sulfate or methionine as the sole sulfur source. The expression of at least 56 genes differed significantly under the two growth conditions. The expression of several genes belonging to the S-box regulon was repressed in the presence of methionine probably in response to S-adenosylmethionine availability. The expression of genes encoding transporters (yhcL, ytmJKLMN, and yxeMO) was high when the sulfur source was methionine or taurine and reduced when it was sulfate.

Indexed as

Gene Expression ProfilingGene Expression Regulation, BacterialOligonucleotide Array Sequence AnalysisBacillus subtilisBacterial ProteinsCulture MediaMethionineRepressor ProteinsS-AdenosylmethionineSulfatesSulfurTranscription, GeneticBacterial ProteinsCulture MediaMethioninemethionine repressor protein, BacteriaRepressor ProteinsS-AdenosylmethionineSulfatesSulfur

Identifiers

PMID12193636
PMCPMC135312
OpenAlexW2070232229

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.