Evidence map›Paper›PMID 12192040›Full record

ArticleMolecular and cellular biology2002

Targeted histone acetylation at the yeast CUP1 promoter requires the transcriptional activator, the TATA boxes, and the putative histone acetylase encoded by SPT10.

Chang-Hui Shen, Benoit P Leblanc, Carolyn Neal, Ramin Akhavan, David J Clark

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

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0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Chang-Hui ShenLaboratory of Cellular and Developmental Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-8028, USA.
Benoit P Leblanc
Carolyn Neal
Ramin Akhavan
David J Clark

Funding

MECHANISM OF ACTIVATED TRANSCRIPTION--YEAST MINICHROMOSOMES AS A MODEL SYSTEMZ01DK015700 · NIDDK · DIABETES, DIGESTIVE, KIDNEY DISEASES · PI CLARK, DAVID J · 1996 to 2003
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6 · The paper itself

Abstract

The relationship between chromatin remodeling and histone acetylation at the yeast CUP1 gene was addressed. CUP1 encodes a metallothionein required for cell growth at high copper concentrations. Induction of CUP1 with copper resulted in targeted acetylation of both H3 and H4 at the CUP1 promoter. Nucleosomes containing upstream activating sequences and sequences farther upstream were the targets for H3 acetylation. Targeted acetylation of H3 and H4 required the transcriptional activator (Ace1p) and the TATA boxes, suggesting that targeted acetylation occurs when TATA-binding protein binds to the TATA box or at a later stage in initiation. We have shown previously that induction results in nucleosome repositioning over the entire CUP1 gene, which requires Ace1p but not the TATA boxes. Therefore, the movement of nucleosomes occurring on CUP1 induction is independent of targeted acetylation. Targeted acetylation of both H3 and H4 also required the product of the SPT10 gene, which encodes a putative histone acetylase implicated in regulation at core promoters. Disruption of SPT10 was lethal at high copper concentrations and correlated with slower induction and reduced maximum levels of CUP1 mRNA. These observations constitute evidence for a novel mechanism of chromatin activation at CUP1, with a major role for the TATA box.

Indexed as

Promoter Regions, GeneticTranscriptional ActivationTranscription, GeneticAcetylationAcetyltransferasesBinding SitesCarrier ProteinsChromatinDNA-Binding ProteinsFungal ProteinsHistone AcetyltransferasesHistonesMetallothioneinModels, GeneticMutationNucleosomesAcetyltransferasesCarrier ProteinsChromatincopper thioneinCUP1-1 protein, S cerevisiaeCUP2 protein, S cerevisiaeDNA-Binding ProteinsFungal ProteinsHistone AcetyltransferasesHistonesMetallothioneinNucleosomesRNA, MessengerSaccharomyces cerevisiae ProteinsSPT10 protein, S cerevisiaeTranscription Factors

Identifiers

PMID12192040
PMCPMC135642

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.