Evidence map›Paper›PMID 12186627›Full record

ArticleThe Biochemical journal2002

Interactions between two fission yeast serine/arginine-rich proteins and their modulation by phosphorylation.

Zhaohua Tang, Norbert F Käufer, Ren-Jang Lin

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

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  6. Fungal alternative splicing is associated with multicellular complexity and virulence: a genome-wide multi-species study.DNA research : an international journal for rapid publication of reports on genes and genomes · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Zhaohua TangDivision of Molecular Biology, Beckman Research Institute of the City of Hope, Duarte, CA 91010, U.S.A.
Norbert F Käufer
Ren-Jang Lin
Beckman Research InstituteTechnische Universität Braunschweig · DE

Funding

FUNCTIONAL SPLICEOSOMES AND EXTRINSIC SPLICING FACTORSR01GM040639 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI LIN, REN-JANG · 1988 to 2006
$2.0M
NIGMS NIH HHS R01 GM040639
6 · The paper itself

Abstract

The unexpected low number of genes in the human genome has triggered increasing attention to alternative pre-mRNA splicing, and serine/arginine-rich (SR) proteins have been correlated with the complex alternative splicing that is a characteristic of metazoans. SR proteins interact with RNA and splicing protein factors, and they also undergo reversible phosphorylation, thereby regulating constitutive and alternative splicing in mammals and Drosophila. However, it is not clear whether the features of SR proteins and alternative splicing are present in simple and genetically tractable organisms, such as yeasts. In the present study, we show that the SR-like proteins Srp1 and Srp2, found in the fission yeast Schizosaccharomyces pombe, interact with each other and the interaction is modulated by protein phosphorylation. By using Srp1 as bait in a yeast two-hybrid analysis, we specifically isolated Srp2 from a random screen. This Srp interaction was confirmed by a glutathione-S-transferase pull-down assay. We also found that the Srp1-Srp2 complex was phosphorylated at a reduced efficiency by a fission yeast SR-specific kinase, Dis1-suppression kinase (Dsk1). Conversely, Dsk1-mediated phosphorylation inhibited the formation of the Srp complex. These findings offer the first example in fission yeast for interactions between SR-related proteins and the modulation of the interactions by specific protein phosphorylation, suggesting that a mammalian-like SR protein function may exist in fission yeast.

Indexed as

Amino Acid SequenceArginineGlutathione TransferaseMolecular Sequence DataPhosphorylationProtein Serine-Threonine KinasesRNA-Binding ProteinsRNA SplicingRNA Splicing FactorsSchizosaccharomycesSchizosaccharomyces pombe ProteinsSerineTwo-Hybrid System TechniquesArginineDsk1 protein kinaseGlutathione TransferaseProtein Serine-Threonine KinasesRNA-Binding ProteinsRNA Splicing FactorsSchizosaccharomyces pombe ProteinsSerineSrp1 protein, S pombesrP2 protein, S pombe

Identifiers

PMID12186627
PMCPMC1223001
OpenAlexW2030955967

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.