Evidence map›Paper›PMID 12181335›Full record

ArticleMolecular biology of the cell2002

Organizational diversity among distinct glycoprotein endoplasmic reticulum-associated degradation programs.

Christopher M Cabral, Yan Liu, Kelley W Moremen, Richard N Sifers

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 109 citations in OpenAlex.

  1. Article
  2. Article
  3. Z-αScience advances · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Advances in alpha-1-antitrypsin deficiency liver disease.Current gastroenterology reports · 2014
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Proteostasis: a new therapeutic paradigm for pulmonary disease.Proceedings of the American Thoracic Society · 2011
    Article
  18. Review
  19. Article
  20. Intracellular processing of alpha1-antitrypsin.Proceedings of the American Thoracic Society · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Christopher M CabralDepartment of Pathology, Baylor College of Medicine, Houston, Texas 77030-3498, USA.
Yan Liu
Kelley W Moremen
Richard N Sifers
Baylor College of Medicine · USUniversity of Georgia · US

Funding

ZINC DEFICIENCY &PROTEIN EXPRESSION IN RAT OLFACTORY BULBSP41RR005351 · NCRR · UNIVERSITY OF GEORGIA (UGA) · PI MOREMEN, KELLEY W. · 1989 to 2011
$18.4M
Mannosidases in Glycoprotein Biosynthesis &CatabolismR01GM047533 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI MOREMEN, KELLEY W. · 1992 to 2008
$2.6M
PATHOBIOGENESIS OF HERITABLE PULMONARY EMPHYSEMAR01HL062553 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI SIFERS, RICHARD NORMAN · 2000 to 2003
$1.1M
NCRR NIH HHS P41 RR005351NCRR NIH HHS RR-05351NHLBI NIH HHS HL-62553NHLBI NIH HHS R01 HL062553NIGMS NIH HHS GM-47533NIGMS NIH HHS R01 GM047533
6 · The paper itself

Abstract

Protein folding and quality control in the early secretory pathway function as posttranslational checkpoints in eukaryote gene expression. Herein, an aberrant form of the hepatic secretory protein alpha1-antitrypsin was stably expressed in a human embryonic kidney cell line to elucidate the mechanisms by which glycoprotein endoplasmic reticulum-associated degradation (GERAD) is administered in cells from higher eukaryotes. After biosynthesis, genetic variant PI Z underwent alternative phases of secretion and degradation, the latter of which was mediated by the proteasome. Degradation required release from calnexin- and asparagine-linked oligosaccharide modification by endoplasmic reticulum mannosidase I, the latter of which occurred as PI Z was bound to the molecular chaperone grp78/BiP. That a distinct GERAD program operates in human embryonic kidney cells was supported by the extent of PI Z secretion, apparent lack of polymerization, inability of calnexin to participate in the degradation process, and sequestration of the glycoprotein folding sensor UDP-glucose:glycoprotein glucosyltransferase in the Golgi complex. Because UDP-glucose:glycoprotein glucosyltransferase sustains calnexin binding, its altered distribution is consistent with a GERAD program that hinders the reentry of substrates into the calnexin cycle, allowing grp78/BiP to partner with a lectin, other than calnexin, in the recognition of a two-component GERAD signal to facilitate substrate recruitment. How the processing of a mutant protein, rather than the mutation itself, can contribute to disease pathogenesis, is discussed.

Indexed as

Heat-Shock ProteinsAlkaloidsalpha 1-AntitrypsinAnimalsCalnexinCarbohydrate SequenceCarrier ProteinsCell LineCysteine EndopeptidasesEndoplasmic ReticulumEndoplasmic Reticulum Chaperone BiPEnzyme InhibitorsGlucosyltransferasesGlycoproteinsHumansMolecular ChaperonesAlkaloidsalpha 1-AntitrypsinCalnexinCarrier ProteinsCysteine EndopeptidasesEndoplasmic Reticulum Chaperone BiPEnzyme InhibitorsGlucosyltransferasesGlycoproteinsHeat-Shock ProteinsHSPA5 protein, humankifunensinelysyl-aspartyl-glutamyl-leucineMolecular ChaperonesMultienzyme ComplexesOligopeptidesProteasome Endopeptidase ComplexProtein IsoformsProtein Sorting SignalsSerine Proteinase InhibitorsUridine Diphosphate Glucose

Identifiers

PMID12181335
PMCPMC117931
OpenAlexW2168009511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.