Evidence map›Paper›PMID 12181333›Full record

ArticleMolecular biology of the cell2002

Scd5p and clathrin function are important for cortical actin organization, endocytosis, and localization of sla2p in yeast.

Kenneth R Henry, Kathleen D'Hondt, JiSuk Chang, Thomas Newpher, Kristen Huang, R Tod Hudson, Howard Riezman, Sandra K Lemmon

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 60 citations in OpenAlex.

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  13. Clathrin light chains function in mannose phosphate receptor trafficking via regulation of actin assembly.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
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  17. Review
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  20. The yeast actin cytoskeleton: from cellular function to biochemical mechanism.Microbiology and molecular biology reviews : MMBR · 2006
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Kenneth R HenryDepartment of Molecular Biology and Microbiology, Case Western Reserve University, Cleveland Ohio 44106, USA.
Kathleen D'Hondt
JiSuk Chang
Thomas Newpher
Kristen Huang
R Tod Hudson
Howard Riezman
Sandra K Lemmon
Case Western Reserve University · USUniversity of Basel · CH

Funding

TRAINING IN METABOLISMT32DK007319 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI BRUNENGRABER, HENRI · 1986 to 2013
$5.0M
SUPPRESSORS OF CLATHRIN DEFICIENCY IN YEASTR01GM055796 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LEMMON, SANDRA K. · 1998 to 2015
$4.7M
CELLULAR &MOLECULAR AGINGT32AG000105 · NIA · CASE WESTERN RESERVE UNIVERSITY · PI CAPLAN, ARNOLD I. · 1985 to 2004
$1.1M
MINORITY PREDOCTORAL FELLOWSHIP PROGRAMF31GM020082 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HENRY, KENNETH R · 1999 to 2002
$62k
CLATHRIN LIGHT CHAIN IN YEASTF32GM017370 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, KRISTEN M · 1995 to 1997
–
NIA NIH HHS T32 AG000105NIA NIH HHS T32 AG00105NIDDK NIH HHS T32 DK007319NIDDK NIH HHS T32 DK7319-23NIGMS NIH HHS F31 GM020082NIGMS NIH HHS F31 GM20082NIGMS NIH HHS F32 GM017370NIGMS NIH HHS F32 GM17370NIGMS NIH HHS R01 GM055796NIGMS NIH HHS R01 GM55796
6 · The paper itself

Abstract

SCD5 was identified as a multicopy suppressor of clathrin HC-deficient yeast. SCD5 is essential, but an scd5-Delta338 mutant, expressing Scd5p with a C-terminal truncation of 338 amino acids, is temperature sensitive for growth. Further studies here demonstrate that scd5-Delta338 affects receptor-mediated and fluid-phase endocytosis and normal actin organization. The scd5-Delta338 mutant contains larger and depolarized cortical actin patches and a prevalence of G-actin bars. scd5-Delta338 also displays synthetic negative genetic interactions with mutations in several other proteins important for cortical actin organization and endocytosis. Moreover, Scd5p colocalizes with cortical actin. Analysis has revealed that clathrin-deficient yeast also have a major defect in cortical actin organization and accumulate G-actin. Overexpression of SCD5 partially suppresses the actin defect of clathrin mutants, whereas combining scd5-Delta338 with a clathrin mutation exacerbates the actin and endocytic phenotypes. Both Scd5p and yeast clathrin physically associate with Sla2p, a homologue of the mammalian huntingtin interacting protein HIP1 and the related HIP1R. Furthermore, Sla2p localization at the cell cortex is dependent on Scd5p and clathrin function. Therefore, Scd5p and clathrin are important for actin organization and endocytosis, and Sla2p may provide a critical link between clathrin and the actin cytoskeleton in yeast, similar to HIP1(R) in animal cells.

Indexed as

ActinsCarrier ProteinsCell PolarityClathrinCytoskeletal ProteinsCytoskeletonEndocytosisMutationProtein BindingProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTwo-Hybrid System TechniquesActinsCarrier ProteinsClathrinCytoskeletal ProteinsSaccharomyces cerevisiae ProteinsSCD5 protein, S cerevisiaeSLA2 protein, S cerevisiae

Identifiers

PMID12181333
PMCPMC117929
OpenAlexW2108345098

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.