Evidence map›Paper›PMID 12176933›Full record

ArticleGenome research2002

Voluntary ethanol consumption by mice: genome-wide analysis of quantitative trait loci and their interactions in a C57BL/6ByJ x 129P3/J F2 intercross.

Alexander A Bachmanov, Danielle R Reed, Xia Li, Shanru Li, Gary K Beauchamp, Michael G Tordoff

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Influence of sex on genetic regulation of "drinking in the dark" alcohol consumption.Mammalian genome : official journal of the International Mammalian Genome Society · 2015
    Article
  9. Article
  10. Genetics of taste receptors.Current pharmaceutical design · 2014
    Review
  11. Article
  12. Article
  13. Quantitative trait loci for sensitivity to ethanol intoxication in a C57BL/6J×129S1/SvImJ inbred mouse cross.Mammalian genome : official journal of the International Mammalian Genome Society · 2012
    Article
  14. Article
  15. Article
  16. Genetics of sweet taste preferences.Flavour and fragrance journal · 2011
    Article
  17. Review
  18. Article
  19. In vitro and in vivo models of acute alcohol exposure.World journal of gastroenterology · 2009
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Alexander A BachmanovMonell Chemical Senses Center, Philadelphia, Pennsylvania 19104, USA. bachmanov@monell.org
Danielle R Reed
Xia Li
Shanru Li
Gary K Beauchamp
Michael G Tordoff
Monell Chemical Senses Center · US

Funding

PHYSIOLOGY OF CALCIUM APPETITER01DK046791 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI TORDOFF, MICHAEL G · 1994 to 2013
$5.5M
MODIFICATION OF SALT TASTER01DC000882 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI BACHMANOV, ALEXANDER A · 1990 to 2013
$4.7M
MAPPING GENES FOR BODY WEIGHT AND FATNESS IN MICER01DK058797 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2000 to 2013
$3.4M
GENETICS OF ALCOHOL RELATED INGESTIVE BEHAVIORS IN MICER01AA011028 · NIAAA · MONELL CHEMICAL SENSES CENTER · PI BACHMANOV, ALEXANDER A · 1997 to 2007
$1.5M
Fine mapping of mouse chr 2 for body composition genesR01DK094759 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2011 to 2014
$1.2M
GENETIC LINKAGE STUDIES OF BITTER TASTE PERCEPTIONR03DC003509 · NIDCD · UNIVERSITY OF PENNSYLVANIA · PI REED, DANIELLE RENEE · 1997 to 1999
–
GENETICS OF CHEMOSENSORY RESPONSES TO SALTS AND ACIDSR03DC003854 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI BACHMANOV, ALEXANDER A · 1998 to 1999
–
NIAAA NIH HHS R01 AA011028NIAAA NIH HHS R01AA11028NIDCD NIH HHS R01 DC000882NIDCD NIH HHS R01DC00882NIDCD NIH HHS R01DC04188NIDCD NIH HHS R03DC03509NIDCD NIH HHS R03DC03854NIDDK NIH HHS R01 DK046791NIDDK NIH HHS R01 DK058797NIDDK NIH HHS R01 DK094759NIDDK NIH HHS R01DK46791NIDDK NIH HHS R01DK55853
6 · The paper itself

Abstract

Consumption of ethanol solutions by rodents in two-bottle choice tests is a model to study human alcohol intake. Mice of the C57BL/6ByJ strain have higher ethanol preferences and intakes than do mice of the 129P3/J strain. F2 hybrids between these two strains were phenotyped using two-bottle tests involving a choice between water and either 3% or 10% ethanol. High ethanol preferences and intakes of the B6 mice were inherited as additive or dominant traits in the F2 generation. A genome screen using these F2 mice identified three significant linkages. Two loci, on distal chromosome 4 (Ap3q) and proximal chromosome 7 (Ap7q), strongly affected 10% ethanol intake and weakly affected 3% ethanol intake. A male-specific locus on proximal chromosome 8 (Ap8q) affected 3% ethanol preference, but not indexes of 10% ethanol consumption. In addition, six suggestive linkages (on chromosomes 2, 9, 12, 13, 17, and 18) affecting indexes of 3% and/or 10% ethanol consumption were detected. The loci with significant and suggestive linkages accounted for 35-44% of the genetic variation in ethanol consumption phenotypes. No additive-by-additive epistatic interactions were detected for the primary loci with significant and suggestive linkages. However, there were a few modifiers of the primary linkages and a number of interactions among unlinked loci. This demonstrates a significant role of the genetic background in the variation of ethanol consumption.

Indexed as

Crosses, GeneticQuantitative Trait, HeritableAlcohol DrinkingAnimalsChromosome MappingEpistasis, GeneticFemaleGenetic LinkageGenetic MarkersMaleMiceMice, Inbred C57BLMice, Inbred StrainsMultifactorial InheritancePhenotypeVolitionGenetic Markers

Identifiers

PMID12176933
PMCPMC186641
OpenAlexW2008020198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.