Evidence map›Paper›PMID 12169635›Full record

ArticleThe EMBO journal2002

Antagonistic regulation of flowering-time gene SOC1 by CONSTANS and FLC via separate promoter motifs.

Shelley R Hepworth, Federico Valverde, Dean Ravenscroft, Aidyn Mouradov, George Coupland

Abstract read
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 193 papers.

0numbers the graph read from it
0cells of the map it votes in
193citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

193 citing papers in PubMed.

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  10. Genome-Wide Reidentification and Expression Analysis ofInternational journal of molecular sciences · 2025
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  14. Gene and Its Promoter Cloning, and Functional Validation ofInternational journal of molecular sciences · 2024
    Article
  15. Article
  16. Article
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  19. Article
  20. Article

133 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shelley R HepworthJohn Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
Federico Valverde
Dean Ravenscroft
Aidyn Mouradov
George Coupland

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flowering in Arabidopsis is controlled by endogenous and environmental signals relayed by distinct genetic pathways. The MADS-box flowering-time gene SOC1 is regulated by several pathways and is proposed to co-ordinate responses to environmental signals. SOC1 is directly activated by CONSTANS (CO) in long photoperiods and is repressed by FLC, a component of the vernalization (low-temperature) pathway. We show that in transgenic plants overexpressing CO and FLC, these proteins regulate flowering time antagonistically and FLC blocks transcriptional activation of SOC1 by CO. A series of SOC1::GUS reporter genes identified a 351 bp promoter sequence that mediates activation by CO and repression by FLC. A CArG box (MADS-domain protein binding element) within this sequence was recognized specifically by FLC in vitro and mediated repression by FLC in vivo, suggesting that FLC binds directly to the SOC1 promoter. We propose that CO is recruited to a separate promoter element by a DNA-binding factor and that activation by CO is impaired when FLC is bound to an adjacent CArG motif.

Indexed as

Gene Expression Regulation, PlantPromoter Regions, GeneticArabidopsisArabidopsis ProteinsDNA-Binding ProteinsDNA, PlantGenes, ReporterMADS Domain ProteinsPlant ProteinsRNA, MessengerRNA, PlantSequence Analysis, DNASignal TransductionTranscription FactorsAGL20 protein, ArabidopsisArabidopsis ProteinsAt5g10140 protein, ArabidopsisCONSTANS protein, ArabidopsisDNA-Binding ProteinsDNA, PlantMADS Domain ProteinsPlant ProteinsRNA, MessengerRNA, PlantTranscription Factors

Identifiers

PMID12169635
PMCPMC126170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.