Evidence map›Paper›PMID 12167718›Full record

ArticleMolecular and cellular biology2002

pipsqueak encodes a factor essential for sequence-specific targeting of a polycomb group protein complex.

Der-Hwa Huang, Yuh-Long Chang, Chih-Chao Yang, I-Ching Pan, Balas King

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Polycomb Recruiters Inside and Outside of the Repressed Domains.International journal of molecular sciences · 2023
    Review
  8. Article
  9. Article
  10. The Paramount Role ofInsects · 2021
    Review
  11. GAGA factor: a multifunctional pioneering chromatin protein.Cellular and molecular life sciences : CMLS · 2021
    Review
  12. Article
  13. Article
  14. Global changes of H3K27me3 domains and Polycomb group protein distribution in the absence of recruiters Spps or Pho.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Transcriptional silencing by polycomb-group proteins.Cold Spring Harbor perspectives in biology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Der-Hwa HuangInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan 115, Republic of China. mbdhuang@ccvax.sinica.edu.tw
Yuh-Long Chang
Chih-Chao Yang
I-Ching Pan
Balas King
Institute of Molecular Biology, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Polycomb (Pc) group (Pc-G) of repressors is essential for transcriptional silencing of homeotic genes that determine the axial development of metazoan animals. It is generally believed that the multimeric complexes formed by these proteins nucleate certain chromatin structures to silence promoter activity upon binding to Pc-G response elements (PRE). Little is known, however, about the molecular mechanism involved in sequence-specific binding of these complexes. Here, we show that an immunoaffinity-purified Pc protein complex contains a DNA binding activity specific to the (GA)n motif in a PRE from the bithoraxoid region. We found that this activity can be attributed primarily to the large protein isoform encoded by pipsqueak (psq) instead of to the well-characterized GAGA factor. The functional relevance of psq to the silencing mechanism is strongly supported by its synergistic interactions with a subset of Pc-G that cause misexpression of homeotic genes.

Indexed as

Genes, HomeoboxAnimalsChromatinChromatography, AffinityDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGene Expression Regulation, DevelopmentalGene SilencingGenes, InsectHomeodomain ProteinsLarvaMacromolecular SubstancesMaleNuclear ProteinsPolycomb Repressive Complex 1ChromatinDNA-Binding ProteinsDrosophila ProteinsHomeodomain ProteinsMacromolecular SubstancesNuclear ProteinsPc protein, DrosophilaPolycomb Repressive Complex 1Protein Isoformspsq protein, DrosophilaTranscription FactorsTrl protein, DrosophilaUbx protein, Drosophila

Identifiers

PMID12167718
PMCPMC134006
OpenAlexW2123829095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.