Evidence map›Paper›PMID 12163589›Full record

ArticleJournal of virology2002

Consistent patterns in the development and immunodominance of human immunodeficiency virus type 1 (HIV-1)-specific CD8+ T-cell responses following acute HIV-1 infection.

Xu G Yu, Marylyn M Addo, Eric S Rosenberg, William R Rodriguez, Paul K Lee, Cecily A Fitzpatrick, Mary N Johnston, Daryld Strick, Philip J R Goulder, Bruce D Walker and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 130 citations in OpenAlex.

  1. Trial
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  4. Immunophenotypic alterations in acute and early HIV infection.Clinical immunology (Orlando, Fla.) · 2007
    Trial
  5. A live, attenuated recombinant West Nile virus vaccine.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Trial
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The T-cell response to HIV.Cold Spring Harbor perspectives in medicine · 2012
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Xu G YuPartners AIDS Research Center and Infectious Disease Division, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Marylyn M Addo
Eric S Rosenberg
William R Rodriguez
Paul K Lee
Cecily A Fitzpatrick
Mary N Johnston
Daryld Strick
Philip J R Goulder
Bruce D Walker
Marcus Altfeld
Massachusetts General Hospital · USHarvard University · US

Funding

INHIBITION OF HIV1 REPLICATION BY CYTOTOXIC LYMPHOCYTESR01AI030914 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI WALKER, BRUCE D · 1991 to 2013
$4.2M
CTL Responses to Regulatory and Accessory HIV-1 ProteinsR01AI050429 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI ALTFELD, MARCUS · 2002 to 2011
$3.7M
IMMUNE CONTROL OF HIV REPLICATIONR01AI044656 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI WALKER, BRUCE D · 1999 to 2003
$2.8M
HIV 1 SPECIFIC CD4 CELLS IN DISEASE PATHOGENESISR01AI040873 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI ROSENBERG, ERIC S · 1997 to 2006
$1.8M
NIAID NIH HHS R01 AI030914NIAID NIH HHS R01 AI040873NIAID NIH HHS R01 AI044656NIAID NIH HHS R01 AI050429NIAID NIH HHS R01 AI30914NIAID NIH HHS R01 AI40873NIAID NIH HHS R01 AI44656NIAID NIH HHS R01 AI50429NIAID NIH HHS R37 AI125568
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1)-specific CD8+ T-cell responses generated during acute infection play a critical role in the initial control of viremia. However, little is known about the viral T-cell epitopes targeted during acute infection or about their hierarchy in appearance and relative immunodominance over time. In this study, HIV-1-specific CD8+ T-cell responses in 18 acutely infected individuals expressing HLA-A3 and/or -B7 were characterized. Detailed analysis of CD8 responses in one such person who underwent treatment of acute infection followed by reexposure to HIV-1 through supervised treatment interruptions (STI) revealed recognition of only two cytotoxic T-lymphocyte (CTL) epitopes during symptomatic acute infection. HIV-1-specific CD8+ T-cell responses broadened significantly during subsequent exposure to the virus, ultimately targeting 27 distinct CTL epitopes, including 15 different CTL epitopes restricted by a single HLA class I allele (HLA-A3). The same few peptides were consistently targeted in an additional 17 persons expressing HLA-A3 and/or -B7 during acute infection. These studies demonstrate a consistent pattern in the development of epitope-specific responses restricted by a single HLA allele during acute HIV-1 infection, as well as persistence of the initial pattern of immunodominance during subsequent STI. In addition, they demonstrate that HIV-1-specific CD8+ T-cell responses can ultimately target a previously unexpected and unprecedented number of epitopes in a single infected individual, even though these are not detectable during the initial exposure to virus. These studies have important implications for vaccine design and evaluation.

Indexed as

Acute DiseaseAmino Acid SequenceAntiretroviral Therapy, Highly ActiveCD8-Positive T-LymphocytesCell LineDrug Administration ScheduleHIV-1HIV InfectionsHLA-A3 AntigenHLA-B7 AntigenHumansImmunodominant EpitopesMolecular Sequence DataPeptidesViral ProteinsHLA-A3 AntigenHLA-B7 AntigenImmunodominant EpitopesPeptidesViral Proteins

Identifiers

PMID12163589
PMCPMC136975
OpenAlexW2123096807

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.