Evidence map›Paper›PMID 12147472›Full record

ArticleApplied and environmental microbiology2002

Identification, characterization, and regulation of a cluster of genes involved in carbapenem biosynthesis in Photorhabdus luminescens.

Sylviane Derzelle, Eric Duchaud, Frank Kunst, Antoine Danchin, Philippe Bertin

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
12.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 129 citations in OpenAlex.

  1. Article
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  3. Frontiers in microbiology · 2022
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  7. The insect-killing bacteriumMarine life science & technology · 2021
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  10. Secondary Metabolites Produced byJournal of nematology · 2017
    Article
  11. 1.8 Å resolution crystal structure of the carbapenem intrinsic resistance protein CarF.Acta crystallographica. Section D, Structural biology · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. In vivo cell tracking with bioluminescence imaging.Nuclear medicine and molecular imaging · 2015
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Sylviane DerzelleUnité de Génétique des Génomes Bactériens, Institut Pasteur, 75724 Paris Cedex 15, France. derzelle@pasteur.fr
Eric Duchaud
Frank Kunst
Antoine Danchin
Philippe Bertin
Institut Pasteur · FRHKU-Pasteur Research Pole · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The luminescent entomopathogenic bacterium Photorhabdus luminescens produces several yet-uncharacterized broad-spectrum antibiotics. We report the identification and characterization of a cluster of eight genes (named cpmA to cpmH) responsible for the production of a carbapenem-like antibiotic in strain TT01 of P. luminescens. The cpm cluster differs in several crucial aspects from other car operons. The level of cpm mRNA peaks during exponential phase and is regulated by a Rap/Hor homolog identified in the P. luminescens genome. Marker-exchange mutagenesis of this gene in the entomopathogen decreased antibiotic production. The luxS-like signaling mechanism of quorum sensing also plays a role in the regulation of the cpm operon. Indeed, luxS, which is involved in the production of a newly identified autoinducer, is responsible for repression of cpm gene expression at the end of the exponential growth phase. The importance of this carbapenem production in the ecology of P. luminescens is discussed.

Indexed as

Gene Expression Regulation, BacterialMultigene FamilyAntibiosisBacterial ProteinsBase SequenceCarbapenemsCarbon-Sulfur LyasesCulture MediaGram-Negative BacteriaMolecular Sequence DataPhotorhabdusTranscription FactorsBacterial ProteinsCarbapenemsCarbon-Sulfur LyasesCulture MediaLuxS protein, Bacteriarap protein, bacteriaTranscription Factors

Identifiers

PMID12147472
PMCPMC124005
OpenAlexW2120846931

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.