Evidence map›Paper›PMID 12147467›Full record

ArticleApplied and environmental microbiology2002

Nonfunctionality of Aspergillus sojae aflR in a strain of Aspergillus parasiticus with a disrupted aflR gene.

Tadashi Takahashi, Perng-Kuang Chang, Kenichiro Matsushima, Jiujiang Yu, Keietsu Abe, Deepak Bhatnagar, Thomas E Cleveland, Yasuji Koyama

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Are CurrentMycobiology · 2023
    Article
  3. Koji Starter and Koji World in Japan.Journal of fungi (Basel, Switzerland) · 2021
    Review
  4. Article
  5. Review
  6. Frontiers in microbiology · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Genomics of Aspergillus oryzae: learning from the history of Koji mold and exploration of its future.DNA research : an international journal for rapid publication of reports on genes and genomes · 2008
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Clustered pathway genes in aflatoxin biosynthesis.Applied and environmental microbiology · 2004
    Review
  18. Mycotoxins.Clinical microbiology reviews · 2003
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tadashi TakahashiResearch and Development Division, Kikkoman Corporation, 399 Noda, Noda-City 278-0037, Japan. ttakahashi@mail.kikkoman.co.jp
Perng-Kuang Chang
Kenichiro Matsushima
Jiujiang Yu
Keietsu Abe
Deepak Bhatnagar
Thomas E Cleveland
Yasuji Koyama

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus sojae belongs to the Aspergillus section Flavi but does not produce aflatoxins. The functionality of the A. sojae aflR gene (aflRs) was examined by transforming it into an DeltaaflR strain of A. parasiticus, derived from a nitrate-nonutilizing, versicolorin A (VERA)-accumulating strain. The A. parasiticus aflR gene (aflRp) transformants produced VERA, but the aflRs transformants did not. Even when aflRs was placed under the control of the amylase gene (amyB) promoter of Aspergillus oryzae, the amy(p)::aflRs transformants did not produce VERA. A chimeric construct containing the aflRs promoter plus the aflRs N- and aflRp C-terminal coding regions could restore VERA production, but a construct containing the aflRp promoter plus the aflRp N- and aflRs C-terminal coding regions could not. These results show that the A. sojae aflR promoter is functional in A. parasiticus and that the HAHA motif does not affect the function of the resulting hybrid AflR. We conclude that the lack of aflatoxin production by A. sojae can be attributed, at least partially, to the premature termination defect in aflRs, which deletes the C-terminal transcription activation domain that is critical for the expression of aflatoxin biosynthetic genes.

Indexed as

Fungal ProteinsGene DeletionTranscription FactorsAmylasesAnthraquinonesAspergillusDNA-Binding ProteinsGenetic Complementation TestPolymerase Chain ReactionPromoter Regions, GeneticRecombinant Fusion ProteinsReverse Transcriptase Polymerase Chain ReactionTranscriptional ActivationTransformation, GeneticAFLR protein, AspergillusAmylasesAnthraquinonesDNA-Binding ProteinsFungal ProteinsRecombinant Fusion ProteinsTranscription Factorsversicolorins

Identifiers

PMID12147467
PMCPMC124037

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.