Evidence map›Paper›PMID 12145212›Full record

ArticleThe EMBO journal2002

Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination.

Bernhard Dichtl, Diana Blank, Martin Sadowski, Wolfgang Hübner, Stefan Weiser, Walter Keller

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 129 citations in OpenAlex.

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  11. Mechanistic insights into mRNA 3'-end processing.Current opinion in structural biology · 2019
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  19. Co-transcriptional mRNP formation is coordinated within a molecular mRNP packaging station in S. cerevisiae.BioEssays : news and reviews in molecular, cellular and developmental biology · 2015
    Review
  20. Review

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Bernhard DichtlDepartment of Cell Biology, Biozentrum, University of Basel, Klingelbergstrasse 70, CH-4056 Basel, Switzerland. bernhard.dichtl@unibas.ch
Diana Blank
Martin Sadowski
Wolfgang Hübner
Stefan Weiser
Walter Keller
University of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA polymerase II (pol II) transcription termination requires co-transcriptional recognition of a functional polyadenylation signal, but the molecular mechanisms that transduce this signal to pol II remain unclear. We show that Yhh1p/Cft1p, the yeast homologue of the mammalian AAUAAA interacting protein CPSF 160, is an RNA-binding protein and provide evidence that it participates in poly(A) site recognition. Interestingly, RNA binding is mediated by a central domain composed of predicted beta-propeller-forming repeats, which occurs in proteins of diverse cellular functions. We also found that Yhh1p/Cft1p bound specifically to the phosphorylated C-terminal domain (CTD) of pol II in vitro and in a two-hybrid test in vivo. Furthermore, transcriptional run-on analysis demonstrated that yhh1 mutants were defective in transcription termination, suggesting that Yhh1p/Cft1p functions in the coupling of transcription and 3'-end formation. We propose that direct interactions of Yhh1p/Cft1p with both the RNA transcript and the CTD are required to communicate poly(A) site recognition to elongating pol II to initiate transcription termination.

Indexed as

ActinsAmino Acid SequenceBinding SitesEscherichia coliMacromolecular SubstancesMolecular Sequence DatamRNA Cleavage and Polyadenylation FactorsPeptide Chain Elongation, TranslationalPeptide Chain Termination, TranslationalPoly AProtein Structure, TertiaryRecombinant Fusion ProteinsRNA-Binding ProteinsRNA, FungalRNA, MessengerRNA Polymerase IIAct1 protein, S cerevisiaeActinsCft1 protein, S cerevisiaeMacromolecular SubstancesmRNA Cleavage and Polyadenylation FactorsPoly ARecombinant Fusion ProteinsRNA-Binding ProteinsRNA, FungalRNA, MessengerRNA Polymerase IISaccharomyces cerevisiae Proteins

Identifiers

PMID12145212
PMCPMC126137
OpenAlexW2035225194

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.