Evidence map›Paper›PMID 12136107›Full record

ArticleNucleic acids research2002

Selective stimulation of translational expression by Alu RNA.

Carol M Rubin, Richard H Kimura, Carl W Schmid

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
  2. Article
  3. Z-DNA and Z-RNA in human disease.Communications biology · 2019
    Review
  4. Review
  5. Article
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  12. Review
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  16. Review
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  19. The double-stranded-RNA-binding motif: interference and much more.Nature reviews. Molecular cell biology · 2004
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Carol M RubinSection of Molecular and Cellular Biology, University of California-Davis, Davis, CA 95616, USA.
Richard H Kimura
Carl W Schmid
University of California, Davis · US

Funding

REPETITIVE DNA SEQUENCES IN THE HUMAN GENOMER01GM021346 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SCHMID, CARL W · 1985 to 2002
$808k
NIGMS NIH HHS GM21346NIGMS NIH HHS R01 GM021346
6 · The paper itself

Abstract

Human Alu and adenovirus VA1 RNAs each stimulate the translational expression of reporter genes in co-transient transfection assays without affecting either the rate of global protein synthesis or the abundance of the reporter mRNA. This selective, post-transcriptional stimulation of expression, which is observed in human and mouse cell lines and for three reporters, acts through a PKR- independent mechanism. The activity of Alu and VA1 RNAs in this assay is transient, causing a reduction in the lag time for the translational expression of the newly synthesized reporter mRNAs. The reduction in this lag time accounts for the relative selectivity of the effect upon the expression of the reporter and suggests novel roles for Alu and VA1 RNA in cell stress recovery and viral infection. Deletion analysis demonstrates that a specific region residing within the right monomer of the dimeric Alu consensus sequence is necessary for activity. Highly abundant left Alu monomer transcripts are inactive but the right Alu monomer is fully active, although its transcripts are scarce. Mouse B1 and B2 SINE RNAs stimulate reporter gene expression in mouse cells, suggesting that this activity is a general property of eucaryotic SINEs.

Indexed as

AdenoviridaeAlu ElementsAnimalsCell LineeIF-2 KinaseGene Expression RegulationHeLa CellsHumansLuciferasesMiceMice, KnockoutMolecular Sequence DataNucleic Acid ConformationPlasmidsProtein BiosynthesisRecombinant Fusion ProteinseIF-2 KinaseLuciferasesRecombinant Fusion ProteinsRNARNA, MessengerRNA, Viral

Identifiers

PMID12136107
PMCPMC135740
OpenAlexW2146976219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.