Evidence map›Paper›PMID 12136015›Full record

ArticleGenetics2002

Coevolution of the telomeric retrotransposons across Drosophila species.

Elena Casacuberta, Mary-Lou Pardue

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Telomerase lost?Chromosoma · 2016
    Review
  7. Article
  8. Article
  9. Article
  10. Retrotransposons that maintain chromosome ends.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  11. Article
  12. Article
  13. Intracellular targeting of telomeric retrotransposon Gag proteins of distantly related Drosophila species.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. HeT-A elements in Drosophila virilis: retrotransposon telomeres are conserved across the Drosophila genus.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Elena CasacubertaDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Mary-Lou Pardue
Massachusetts Institute of Technology · US

Funding

HET-A, A RETROPOSON WITH A ROLE IN CHROMOSOME STRUCTURER01GM050315 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI PARDUE, MARY-LOU · 1995 to 2006
$2.3M
An Evolutionary Link Between Telomeres and TransposonsR56GM050315 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI PARDUE, MARY-LOU · 2008 to 2008
$399k
NIGMS NIH HHS GM 50315
6 · The paper itself

Abstract

As in other eukaryotes, telomeres in Drosophila melanogaster are composed of long arrays of repeated DNA sequences. Remarkably, in D. melanogaster these repeats are produced, not by telomerase, but by successive transpositions of two telomere-specific retrotransposons, HeT-A and TART. These are the only transposable elements known to be completely dedicated to a role in chromosomes, a finding that provides an opportunity for investigating questions about the evolution of telomeres, telomerase, and the transposable elements themselves. Recent studies of D. yakuba revealed the presence of HeT-A elements with precisely the same unusual characteristics as HeT-A(mel) although they had only 55% nucleotide sequence identity. We now report that the second element, TART, is also a telomere component in D. yakuba; thus, these two elements have been evolving together since before the separation of the melanogaster and yakuba species complexes. Like HeT-A(yak), TART(yak) is undergoing concerted sequence evolution, yet they retain the unusual features TART(mel) shares with HeT-A(mel). There are at least two subfamilies of TART(yak) with significantly different sequence and expression. Surprisingly, one subfamily of TART(yak) has >95% sequence identity with a subfamily of TART(mel) and shows similar transcription patterns. As in D. melanogaster, other retrotransposons are excluded from the D. yakuba terminal arrays studied to date.

Indexed as

Evolution, MolecularAnimalsBase SequenceDNADNA PrimersDrosophilaDrosophila ProteinsMaleMolecular Sequence DataOpen Reading FramesPolymerase Chain ReactionRepetitive Sequences, Nucleic AcidRetroelementsRNA-Directed DNA PolymeraseTelomereY ChromosomeDNADNA PrimersDrosophila ProteinsRetroelementsRNA-Directed DNA PolymeraseTART-element-gag protein, Drosophila

Identifiers

PMID12136015
PMCPMC1462189
OpenAlexW2104706182

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.