Evidence map›Paper›PMID 12134031›Full record

ArticleJournal of virology2002

Transcriptional regulation of the interleukin-6 gene of human herpesvirus 8 (Kaposi's sarcoma-associated herpesvirus).

Hongyu Deng, Moon Jung Song, Julia T Chu, Ren Sun

Abstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 123 citations in OpenAlex.

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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hongyu DengDepartment of Molecular and Medical Pharmacology, UCLA AIDS Institute, Jonsson Comprehensive Cancer Center, University of California at Los Angeles, 90095, USA.
Moon Jung Song
Julia T Chu
Ren Sun
University of California, Los Angeles · US

Funding

Reactivation of Kaposi's Sarcoma-Associated HerpesvirusR01CA091791 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SUN, REN · 2001 to 2017
$4.4M
Viral Lysis of Kaposi's Sarcoma Tumor CellsR01DE014153 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SUN, REN · 2001 to 2004
$1.1M
POLYADENYLATED NUCLEAR RNA OF HUMAN HERPESVIRUS-8R01CA083525 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SUN, REN · 1999 to 2001
$472k
AIDS INSTITUTIONAL TRAINING GRANTT32AI007388 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KROGSTAD, PAUL A · 1990 to 1999
–
NCI NIH HHS CA83525NCI NIH HHS CA91791NCI NIH HHS R01 CA091791NIAID NIH HHS T32 AI007388NIAID NIH HHS T32 AI07388NIDCR NIH HHS DE14153NIDCR NIH HHS R01 DE014153
6 · The paper itself

Abstract

Human herpesvirus 8 (HHV-8; Kaposi's sarcoma-associated herpesvirus is linked to Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and multicentric Castleman's disease (MCD), all of which are viewed as cytokine-driven malignancies. In particular, interleukin-6 (IL-6) has been found to promote the growth and proliferation of cells from KS and PEL. HHV-8 encodes a homologue of IL-6 (viral IL-6 [vIL-6]), which functions similarly to the cellular IL-6. Therefore, vIL-6 has been proposed to play an important role in tumor progression. Several groups have reported that vIL-6 is expressed from the HHV-8 genome at higher levels in PEL and MCD lesions than in KS lesions. However, it is not clear how vIL-6 expression is regulated. We characterized the transcription at the vIL-6 gene locus by Northern blot analysis and, in contrast to previous reports, we observed two distinct transcripts from induced PEL cell lines. This observation was confirmed by primer extension, as well as 5' and 3' rapid amplification of cDNA ends. Two transcription initiation sites and putative TATA boxes were mapped. A luciferase reporter system was used to show that each of the two putative TATA boxes contributed to vIL-6 promoter activity. Since virally encoded transcriptional activator Rta potently activates the viral lytic gene expression cascade, we examined the role of Rta in controlling vIL-6 gene expression and found that Rta activated the vIL-6 promoter. The Rta-responsive element was further mapped through a series of deletion constructs. Electrophoretic mobility shift assays demonstrated that Rta binds directly to the vIL-6 Rta-responsive element, and the core Rta-responsive element was mapped to a 26-bp region spanning from nucleotide 18315 to 18290 on the viral genome. We propose that the existence of two vIL-6 promoters offers opportunities for differential regulation of vIL-6 gene expression in different tissue types and may account for the variable vIL-6 levels observed in KS, PEL, and MCD.

Indexed as

Genes, ViralAmino Acid SequenceBase SequenceCastleman DiseaseCell LineChromosome MappingGene Expression Regulation, ViralGenes, ReporterHerpesviridae InfectionsHerpesvirus 8, HumanHumansImmediate-Early ProteinsInterleukin-6LuciferasesLymphomaMolecular Sequence DataImmediate-Early ProteinsInterleukin-6LuciferasesRNA, MessengerRNA, ViralRta protein, Human herpesvirus 8Trans-ActivatorsViral Proteins

Identifiers

PMID12134031
PMCPMC155161
OpenAlexW2091558286

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.