Evidence map›Paper›PMID 12130544›Full record

ArticleGenes & development2002

TFIID and human mediator coactivator complexes assemble cooperatively on promoter DNA.

Kristina M Johnson, Jin Wang, Andrea Smallwood, Charina Arayata, Michael Carey

Abstract read
In one paragraph

Article in Genes & development, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Elongin functions as a loading factor for Mediator at ATF6α-regulated ER stress response genes.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. The complex structure and function of Mediator.The Journal of biological chemistry · 2018
    Review
  12. Transcription regulation by the Mediator complex.Nature reviews. Molecular cell biology · 2018
    Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Advances in bioinformatics · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kristina M JohnsonDepartment of Biological Chemistry, University of California, Los Angeles School of Medicine, Los Angeles, California 90095-1737, USA.
Jin Wang
Andrea Smallwood
Charina Arayata
Michael Carey

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Mechanisms of Synergistic Gene Activation by ZEBRAR01GM057283 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CAREY, MICHAEL F · 1998 to 2005
$1.4M
NIGMS NIH HHS GM057283NIGMS NIH HHS GM07185NIGMS NIH HHS R01 GM057283NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

Activator-mediated transcription complex assembly on templates lacking chromatin requires the interaction of activators with two major coactivator complexes: TFIID and mediator. Here we employed immobilized template assays to correlate transcriptional activation with mediator and TFIID recruitment. In reactions reconstituted with purified proteins, we found that activator, TFIID, and mediator engage in reciprocal cooperative interactions to form a complex on promoter DNA. Preassembly of the coactivator complex accelerates the rate of transcription in a cell-free system depleted of TFIID and mediator. Our data argue that this coactivator complex is an intermediate in the assembly of an active transcription complex. Furthermore, the reciprocity of the interactions demonstrates that the complex could in principle be nucleated with either TFIID or mediator, implying that alternative pathways could be utilized to generate diversity in the way activators function in vivo.

Indexed as

Promoter Regions, GeneticTranscription FactorsCarrier ProteinsCell ExtractsCell NucleusDNAHeLa CellsHumansMediator ComplexMediator Complex Subunit 1Nuclear ProteinsTrans-ActivatorsTranscription Factors, TFIITranscription Factor TFIIDTranscription, GeneticCarrier ProteinsCell ExtractsDNADRIP, VDR interacting protein complexGal-VP16MED1 protein, humanMED4 protein, humanMediator ComplexMediator Complex Subunit 1Nuclear ProteinsTrans-ActivatorsTranscription FactorsTranscription Factors, TFIITranscription Factor TFIID

Identifiers

PMID12130544
PMCPMC186393

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.