Evidence map›Paper›PMID 12101129›Full record

ArticleGenes & development2002

Transcription factor complex formation and chromatin fine structure alterations at the murine c-fms (CSF-1 receptor) locus during maturation of myeloid precursor cells.

Hiromi Tagoh, Roy Himes, Deborah Clarke, Pieter J M Leenen, Arthur D Riggs, David Hume, Constanze Bonifer

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. The M-CSF receptor in osteoclasts and beyond.Experimental & molecular medicine · 2020
    Review
  8. Article
  9. Article
  10. Myelopoiesis of the AmphibianFrontiers in immunology · 2019
    Article
  11. Article
  12. Evolutionary Aspects of Macrophages Polarization.Results and problems in cell differentiation · 2017
    Review
  13. Article
  14. A Csf1r-EGFP Transgene Provides a Novel Marker for Monocyte Subsets in Sheep.Journal of immunology (Baltimore, Md. : 1950) · 2016
    Article
  15. Review
  16. Amphibian macrophage development and antiviral defenses.Developmental and comparative immunology · 2016
    Review
  17. Article
  18. CSF-1 receptor signaling in myeloid cells.Cold Spring Harbor perspectives in biology · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 4 countries.

Hiromi TagohMolecular Medicine Unit, University of Leeds, St. James's University Hospital, Leeds LS9 7TF, UK.
Roy Himes
Deborah Clarke
Pieter J M Leenen
Arthur D Riggs
David Hume
Constanze Bonifer
St James's University Hospital · GBUniversity of Leeds · GBCity of Hope · USErasmus MC · NLUniversity of Queensland · AU

Funding

Wellcome Trust
6 · The paper itself

Abstract

Expression of the gene for the macrophage colony stimulating factor receptor (CSF-1R), c-fms, has been viewed as a hallmark of the commitment of multipotent precursor cells to macrophages. Lineage-restricted expression of the gene is controlled by conserved elements in the proximal promoter and within the first intron. To investigate the developmental regulation of c-fms at the level of chromatin structure, we developed an in vitro system to examine the maturation of multipotent myeloid precursor cells into mature macrophages. The dynamics of chromatin fine structure alterations and transcription factor occupancy at the c-fms promoter and intronic enhancer was examined by in vivo DMS and UV-footprinting. We show that the c-fms gene is already transcribed at low levels in early myeloid precursors on which no CSF-1R surface expression can be detected. At this stage of myelopoiesis, the formation of transcription factor complexes on the promoter was complete. By contrast, occupancy of the enhancer was acutely regulated during macrophage differentiation. Our data show that cell-intrinsic differentiation decisions at the c-fms locus precede the appearance of c-fms on the cell surface. They also suggest that complex lineage-specific enhancers such as the c-fms intronic enhancer regulate local chromatin structure through the coordinated assembly and disassembly of distinct transcription factor complexes.

Indexed as

Cell DifferentiationAnimalsBase SequenceCells, CulturedChromatinDNA FootprintingHematopoietic Stem CellsIntronsMacrophagesMiceMolecular Sequence DataReceptor, Macrophage Colony-Stimulating FactorRNA, MessengerTranscription FactorsChromatinReceptor, Macrophage Colony-Stimulating FactorRNA, MessengerTranscription Factors

Identifiers

PMID12101129
PMCPMC186377
OpenAlexW2155644156

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.