Evidence map›Paper›PMID 12097571›Full record

ArticleJournal of virology2002

Viral gene expression patterns in human herpesvirus 6B-infected T cells.

Bodil Øster, Per Höllsberg

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 49 citations in OpenAlex.

  1. Tissue and cellular tropism ofVeterinary pathology · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Observational
  6. Article
  7. RNA Sequencing of theJournal of virology · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Roseolovirus molecular biology: recent advances.Current opinion in virology · 2014
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Human herpesvirus 6 infections after liver transplantation.World journal of gastroenterology · 2009
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Bodil ØsterDepartment of Medical Microbiology and Immunology, University of Aarhus, DK-8000 Aarhus C, Denmark.
Per Höllsberg
Aarhus University · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Herpesvirus gene expression is divided into immediate-early (IE) or alpha genes, early (E) or beta genes, and late (L) or gamma genes on the basis of temporal expression and dependency on other gene products. By using real-time PCR, we have investigated the expression of 35 human herpesvirus 6B (HHV-6B) genes in T cells infected by strain PL-1. Kinetic analysis and dependency on de novo protein synthesis and viral DNA polymerase activity suggest that the HHV-6B genes segregate into six separate kinetic groups. The genes expressed early (groups I and II) and late (groups V and VI) corresponded well with IE and L genes, whereas the intermediate groups III and IV contained E and L genes. Although HHV-6B has characteristics similar to those of other roseoloviruses in its overall gene regulation, we detected three B-variant-specific IE genes. Moreover, genes that were independent of de novo protein synthesis clustered in an area of the viral genome that has the lowest identity to the HHV-6A variant. The organization of IE genes in an area of the genome that differs from that of HHV-6A underscores the distinct differences between HHV-6B and HHV-6A and may provide a basis for further molecular and immunological analyses to elucidate their different biological behaviors.

Indexed as

Gene Expression Regulation, ViralBase SequenceCell LineDNA-Directed DNA PolymeraseHerpesvirus 6, HumanHumansImmediate-Early ProteinsMolecular Sequence DataT-LymphocytesTranscription, GeneticViral ProteinsDNA-Directed DNA PolymeraseImmediate-Early ProteinsViral Proteins

Identifiers

PMID12097571
PMCPMC136387
OpenAlexW2102498958

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.