Evidence map›Paper›PMID 12097256›Full record

ArticleCancer research2002

Prospective molecular profiling of melanoma metastases suggests classifiers of immune responsiveness.

Ena Wang, Lance D Miller, Galen A Ohnmacht, Simone Mocellin, Ainhoa Perez-Diez, David Petersen, Yingdong Zhao, Richard Simon, John I Powell, Esther Asaki and 7 more

Abstract read
In one paragraph

Article in Cancer research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed.

  1. Serum vascular endothelial growth factor and fibronectin predict clinical response to high-dose interleukin-2 therapy.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2009
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  15. Cancer immune resistance: can theories converge?Emerging topics in life sciences · 2017
    Article
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  17. Review
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  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Ena WangImmunogenetics Section, Department of Transfusion Medicine, Clinical Center, NIH, Bethesda, Maryland 20892, USA.
Lance D Miller
Galen A Ohnmacht
Simone Mocellin
Ainhoa Perez-Diez
David Petersen
Yingdong Zhao
Richard Simon
John I Powell
Esther Asaki
H Richard Alexander
Paul H Duray
Meenhard Herlyn
Nicholas P Restifo
Edison T Liu
Steven A Rosenberg
Francesco M Marincola

Funding

Building on the success of the adoptive immunotherapy of cancerZ01BC010763 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RESTIFO, NICHOLAS P · 2006 to 2008
$6.4M
Computational Tools For Bioinformatics &Genome AnalysisZ01CT000260 · CIT · COMPUTER RESEARCH AND TECHNOLOGY · PI POWELL, JOHN I · 1996 to 2008
$1.6M
Immunogenetics of Vaccine TherapyZ01CL002115 · CLC · CLINICAL CENTER · PI MARINCOLA, FRANCESCO M · 2003 to 2005
–
Intramural NIH HHS Z01 BC010763Intramural NIH HHS Z99 CA999999
6 · The paper itself

Abstract

We amplified RNAs from 63 fine needle aspiration (FNA) samples from 37 s.c. melanoma metastases from 25 patients undergoing immunotherapy for hybridization to a 6108-gene human cDNA chip. By prospectively following the history of the lesions, we could correlate transcript patterns with clinical outcome. Cluster analysis revealed a tight relationship among autologous synchronously sampled tumors compared with unrelated lesions (average Pearson's r = 0.83 and 0.7, respectively, P < 0.0003). As reported previously, two subgroups of metastatic melanoma lesions were identified that, however, had no predictive correlation with clinical outcome. Ranking of gene expression data from pretreatment samples identified approximately 30 genes predictive of clinical response (P < 0.001). Analysis of their annotations denoted that approximately half of them were related to T-cell regulation, suggesting that immune responsiveness might be predetermined by a tumor microenvironment conducive to immune recognition.

Indexed as

AdultAgedBiopsy, NeedleCluster AnalysisFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansImmunityImmunotherapyMaleMelanomaMiddle AgedOligonucleotide Array Sequence AnalysisProspective Studies

Identifiers

PMID12097256
PMCPMC2241738

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.