Evidence map›Paper›PMID 12093744›Full record

ArticleThe EMBO journal2002

An embryonic/fetal beta-type globin gene repressor contains a nuclear receptor TR2/TR4 heterodimer.

Osamu Tanabe, Fumiki Katsuoka, Andrew D Campbell, Weimin Song, Masayuki Yamamoto, Keiji Tanimoto, James Douglas Engel

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 114 citations in OpenAlex.

  1. Review
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  14. Role of Nuclear Receptors in Controlling Erythropoiesis.International journal of molecular sciences · 2022
    Review
  15. Article
  16. Article
  17. Physiological and Aberrant γ-Globin Transcription During Development.Frontiers in cell and developmental biology · 2021
    Review
  18. Review
  19. Review
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Osamu TanabeDepartment of Biochemistry, Molecular Biology and Cell Biology, and Robert H.Lurie Comprehensive Cancer Center, Northwestern University, Evanston, IL 60208-3500, USA.
Fumiki Katsuoka
Andrew D Campbell
Weimin Song
Masayuki Yamamoto
Keiji Tanimoto
James Douglas Engel
Northwestern University · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
EXPRESSION OF DEVELOPMENTALLY RELATED AVIAN GENESR01HL024415 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ENGEL, JAMES DOUGLAS · 1985 to 2009
$3.3M
CLINICAL ONCOLOGY RESEARCH TRAINING PROGRAMT32CA079447 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LICHT, JONATHAN D. · 1999 to 2013
$3.1M
NCI NIH HHS CA79447NCI NIH HHS P30 CA060553NCI NIH HHS P30 CA60553NCI NIH HHS T32 CA079447NHLBI NIH HHS R01 HL024415NHLBI NIH HHS R01 HL24415
6 · The paper itself

Abstract

We recently described an erythroid epsilon-globin gene repressor activity, which we named DRED (direct repeat erythroid-definitive). We show that DRED binds with high affinity to DR1 sites in the human embryonic (epsilon-) and fetal (gamma-) globin gene promoters, but the adult beta-globin promoter has no DR1 element. DRED is a 540 kDa complex; sequence determination showed that it contains the nuclear orphan receptors TR2 and TR4. TR2 and TR4 form a heterodimer that binds to the epsilon and gamma promoter DR1 sites. One mutation in a DR1 site causes elevated gamma-globin transcription in human HPFH (hereditary persistence of fetal hemoglobin) syndrome, and we show that this mutation reduces TR2/TR4 binding in vitro. The two receptor mRNAs are expressed at all stages of murine and human erythropoiesis; their forced transgenic expression reduces endogenous embryonic epsilony-globin transcription. These data suggest that TR2/TR4 forms the core of a larger DRED complex that represses embryonic and fetal globin transcription in definitive erythroid cells, and therefore that inhibition of its activity might be an attractive intervention point for treating sickle cell anemia.

Indexed as

Gene Expression Regulation, DevelopmentalAdultAnemia, Sickle CellAnimalsDimerizationDrug DesignErythroid Precursor CellsErythropoiesisFetal BloodFetal HemoglobinGlobinsHemoglobinopathiesHumansK562 CellsLeukemia, Erythroblastic, AcuteMacromolecular SubstancesFetal HemoglobinGlobinsMacromolecular SubstancesNeoplasm ProteinsNerve Tissue ProteinsNR2C1 protein, humanNr2c1 protein, mouseNR2C2 protein, humanNr2c2 protein, mouseNuclear Receptor Subfamily 2, Group C, Member 1Receptors, SteroidReceptors, Thyroid HormoneRecombinant Fusion ProteinsRepressor ProteinsRNA, Messenger

Identifiers

PMID12093744
PMCPMC126089
OpenAlexW2079754560

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.