Evidence map›Paper›PMID 12089271›Full record

ArticleJournal of clinical microbiology2002

Detection of isoniazid-resistant Mycobacterium tuberculosis strains by a multiplex allele-specific PCR assay targeting katG codon 315 variation.

Igor Mokrousov, Tatiana Otten, Maxim Filipenko, Anna Vyazovaya, Eugeny Chrapov, Elena Limeschenko, Lidia Steklova, Boris Vyshnevskiy, Olga Narvskaya

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In one paragraph

Article in Journal of clinical microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 98 citations in OpenAlex.

  1. Article
  2. Catalase-peroxidase (KatG): a potential frontier in tuberculosis drug development.Critical reviews in biochemistry and molecular biology · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Rapid detection of drug-resistantThe Indian journal of medical research · 2019
    Article
  7. Review
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  9. Article
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  11. Article
  12. Article
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  14. Article
  15. A rapid antimicrobial susceptibility test for Bacillus anthracis.Antimicrobial agents and chemotherapy · 2010
    Article
  16. Article
  17. Multidrug-resistant tuberculosis: rapid detection of resistance to rifampin and high or low levels of isoniazid in clinical specimens and isolates.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2008
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Igor MokrousovLaboratory of Molecular Microbiology, St. Petersburg Pasteur Institute, 197101 St. Petersburg, Russia. miv@IM4520.spb.edu
Tatiana Otten
Maxim Filipenko
Anna Vyazovaya
Eugeny Chrapov
Elena Limeschenko
Lidia Steklova
Boris Vyshnevskiy
Olga Narvskaya
Saint Petersburg Pasteur Institute · RUSaint-Petersburg Research Institute of Phthisiopulmonology · RUSiberian Branch of the Russian Academy of Sciences · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe a simple multiplex allele-specific (MAS)-PCR assay to detect mutations in the second base of the katG gene codon 315, including AGC-->ACC and ACA (Ser-->Thr) substitutions that confer resistance to isoniazid (INH) in Mycobacterium tuberculosis clinical isolates. The 315 ACC allele is found in the majority of Inh(r) strains worldwide, especially in areas with a high incidence of tuberculosis. The 315 ACA allele is characteristic of the New York City multidrug-resistant (MDR) strain W and its progenies in the United States. The mutations in katG315 are revealed depending on the presence or absence of an indicative fragment amplified from the wild-type allele of this codon. Initially optimized on the purified DNA samples, the assay was then tested on crude cell lysates and auramine-stained sputum slide preparations with the same reproducibility and interpretability of profiles generated by agarose gel electrophoresis. The MAS-PCR assay can be used for the detection of resistance to INH in clinical laboratories in regions with a high prevalence of MDR M. tuberculosis strains.

Indexed as

Bacterial ProteinsAdolescentAdultAllelesAntitubercular AgentsBase SequenceCodonDNA, BacterialDrug Resistance, BacterialGenes, BacterialGenetic VariationHumansIsoniazidMiddle AgedMycobacterium tuberculosisPeroxidasesAntitubercular AgentsBacterial Proteinscatalase HPICodonDNA, BacterialIsoniazidPeroxidases

Identifiers

PMID12089271
PMCPMC120554
OpenAlexW2157364615

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.