Evidence map›Paper›PMID 12084744›Full record

ArticleThe British journal of ophthalmology2002

Polymerase chain reaction based detection of fungi in infected corneas.

P A Gaudio, U Gopinathan, V Sangwan, T E Hughes

Open access · bronzeAbstract readComparative StudyEvaluation Study
In one paragraph

Article in The British journal of ophthalmology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. [Corneal wound healing-Pathophysiology and principles].Der Ophthalmologe : Zeitschrift der Deutschen Ophthalmologischen Gesellschaft · 2021
    Article
  3. Article
  4. An Omics Approach to Diagnosing or Investigating Fungal Keratitis.International journal of molecular sciences · 2019
    Review
  5. The pathogenic spectrum of fungal keratitis in northwestern China.International journal of ophthalmology · 2016
    Article
  6. Article
  7. Article
  8. Evaluation of molecular diagnosis in fungal keratitis. Ten years of experience.Journal of ophthalmic inflammation and infection · 2011
    Article
  9. Article
  10. Article
  11. Current perspectives on ophthalmic mycoses.Clinical microbiology reviews · 2003
    Review
  12. Article
  13. Emerging diagnostic modalities in microbial keratitis: Beyond culture and smear.Saudi journal of ophthalmology : official journal of the Saudi Ophthalmological Society
    Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

P A GaudioYale Eye Center, New Haven, CT 06520, USA.
U Gopinathan
V Sangwan
T E Hughes
L V Prasad Eye Institute · INYale Cancer Center · US

Funding

TRANSMITTER/RECEPTOR-SPECIFIC CIRCUITRY IN THE RETINAR01EY008362 · NEI · YALE UNIVERSITY · PI HUGHES, THOMAS E · 1990 to 2001
$591k
NEI NIH HHS R01EY 08362
6 · The paper itself

Abstract

aimsTo evaluate a polymerase chain reaction (PCR) based assay to detect fungi in scrapings from infected corneas.

methodsA PCR assay was developed to amplify a portion of the fungal 18S ribosome gene. Corneal scrapings from 30 patients with presumed infectious keratitis were evaluated using this assay, as well as by standard microbiological techniques, and the results were compared. Conjunctival swabs from each patient's healthy, fellow eye were also evaluated by PCR.

resultsPCR and fungal culture results matched (were both positive or both negative for fungi) in 22 (74%) of 30 scrapings from infected corneas. Three (10%) of 30 samples were PCR positive but fungal culture negative; two of these appeared clinically to represent fungal infections, and the third was clinically indeterminate. Four (13%) scrapings were positive by PCR but also by bacterial and not fungal culture. One specimen (3%) was PCR negative but fungal culture positive. Of the conjunctival swabs from each patient's healthy fellow eye, five (17%) of 30 were positive by PCR, and the opposite, infected eye of all five of these harboured a fungal infection.

conclusionsPCR is promising as a means to diagnose fungal keratitis and offers some advantages over culture methods, including rapid analysis and the ability to analyse specimens far from where they are collected.

Indexed as

RNA, Ribosomal, 18SCandidaFusariumHumansKeratitisMicrobiological TechniquesPolymerase Chain ReactionRNA, FungalSensitivity and SpecificityRNA, FungalRNA, Ribosomal, 18S

Identifiers

PMID12084744
PMCPMC1771212
OpenAlexW2115554882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.