Evidence map›Paper›PMID 12082626›Full record

ArticleOncogene2002

Chromatin remodeling factor encoded by ini1 induces G1 arrest and apoptosis in ini1-deficient cells.

Keisuke Ae, Noriko Kobayashi, Ryuta Sakuma, Toshihiko Ogata, Hiroshi Kuroda, Noriyoshi Kawaguchi, Kenichi Shinomiya, Yoshihiro Kitamura

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Chapter 5. Nuclear actin-related proteins in epigenetic control.International review of cell and molecular biology · 2009
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Keisuke AeDivision of Molecular Genetics, National Institute of Infectious Diseases, Gakuen 4-7-1, Musashimurayama, Tokyo 208-0011, Japan.
Noriko Kobayashi
Ryuta Sakuma
Toshihiko Ogata
Hiroshi Kuroda
Noriyoshi Kawaguchi
Kenichi Shinomiya
Yoshihiro Kitamura
National Institute of Infectious Diseases · JPTokyo Medical and Dental University · JPJapanese Foundation For Cancer Research · JPTokyo University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ini1/hsnf5 gene encodes INI1 protein, a chromatin remodeling factor associated with the SWI/SNF complex. In yeast, this complex modifies chromatin condensation to coactivate various transcriptional factors. However, in human, little is known about the SWI/SNF complex and INI1. To elucidate cellular functions of ini1, we constructed a recombinant adenovirus (AdexHA-INI1) capable of overexpressing INI1 in ini1-deficient cells. AdexHA-INI1 produced intranuclear INI1 in three ini1-deficient cell lines, changed their morphology, and decreased the proportion of viable cells. Flow cytometry and a BrdU incorporation assay showed that after the infection, growth of these cells was partially arrested at G1. In two of the three ini1-deficient cell lines, apoptosis was found to occur after the infection, as detected by the presence of cleaved poly (ADP-ribose) polymerase. To determine functional domains of INI1, we constructed plasmids expressing INI1 and its deletion mutants, which were used for a colony formation assay. Repeats 1 and 2 of INI1 were found to be required to suppress the growth of the three ini1-deficient cell lines. The results support the hypothesis that ini1 is a tumor suppressor gene and suggest a novel link between human SWI/SNF chromatin remodeling complex and apoptosis.

Indexed as

Drosophila ProteinsGenes, Tumor SuppressorRNA-Binding ProteinsAdenoviridaeApoptosisChildChromatinChromosomal Proteins, Non-HistoneColony-Forming Units AssayDNA-Binding ProteinsDNA ReplicationFlow CytometryG1 PhaseGenetic VectorsHeLa CellsHumansChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDrosophila ProteinsPoly(ADP-ribose) PolymerasesRecombinant Fusion ProteinsRibonucleoprotein, U1 Small NuclearRNA-Binding ProteinsSMARCB1 ProteinSMARCB1 protein, humansnf protein, DrosophilaTranscription Factors

Identifiers

PMID12082626
OpenAlexW2317196974

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.