Evidence map›Paper›PMID 12082541›Full record

ArticleOncogene2002

Genomic organization of a novel glycosylphosphatidylinositol MAM gene expressed in human tissues and tumors.

Carmen De Juan, Pilar Iniesta, Rosa González-Quevedo, Alberto Morán, Andrés Sánchez-Pernaute, Antonio J Torres, Jose Luis Balibrea, Eduardo Díaz-Rubio, Jesús Cruces, Manuel Benito

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Oncogene, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. MDGAs interact selectively with neuroligin-2 but not other neuroligins to regulate inhibitory synapse development.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  5. Expression of Human MDGA1 Increases Cell Motility and Cell-Cell Adhesion and Reduces Adhesion to Extracellular Matrix Proteins in MDCK Cells.Cancer microenvironment : official journal of the International Cancer Microenvironment Society · 2010
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Carmen De JuanDepartamento de Bioquímica y Biología Molecular, Facultad de Farmacia, Universidad Complutense de Madrid, 28040 Madrid, Spain.
Pilar Iniesta
Rosa González-Quevedo
Alberto Morán
Andrés Sánchez-Pernaute
Antonio J Torres
Jose Luis Balibrea
Eduardo Díaz-Rubio
Jesús Cruces
Manuel Benito
Universidad Complutense de Madrid · ESHospital Clínico San Carlos · ESUniversidad Autónoma de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report the genomic organization of a novel human gene mapped to chromosome 6p21, encoding a putative glycosylphosphatidylinositol (GPI) anchored protein containing a MAM (meprin, A5 antigen, protein tyrosine phosphatase mu) domain, that we have termed as GPIM (GPI and MAM) protein. GPIM gene consists of an 8.9 kb transcript composed of 17 coding exons spanning about 65.5 kb of genomic DNA. The deduced polypeptide consists of 955 amino acids and exhibits structural features found in different types of cell adhesion molecules (CAMs), such as the presence of immunoglobulin domains, the presence of a MAM domain or the capacity to anchor to the cell membrane by a GPI motif. Expression analysis in normal human tissues revealed that this gene is expressed as a 5 kb and 9.5 kb mRNA. Furthermore, the smaller transcript is highly expressed in some human cancer cell lines, as well as in different primary tumors (lung, colon, uterus, stomach and breast). Interestingly, the gene was higher expressed in several tumor tissues analysed as compared to their corresponding normal tissues. Thus, GPIM is a novel gene codifying a protein with structural features characteristics of some CAMs, which might be involved in the tumor progression.

Indexed as

GenesAmino Acid SequenceAnimalsBase SequenceCattleCell Adhesion MoleculesChromosomes, Human, Pair 6Disease ProgressionDNA, NeoplasmExpressed Sequence TagsFemaleGene ExpressionGlycosylphosphatidylinositolsGPI-Linked ProteinsHumansMaleCell Adhesion MoleculesDNA, NeoplasmGlycosylphosphatidylinositolsGPI-Linked ProteinsMDGA1 protein, humanNeoplasm ProteinsNeural Cell Adhesion MoleculesRNA, Messenger

Identifiers

PMID12082541
OpenAlexW2335390550

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.