Evidence map›Paper›PMID 12081367›Full record

ArticlePlant molecular biology2002

Ntlim1, a PAL-box binding factor, controls promoter activity of the horseradish wound-inducible peroxidase gene.

Pulla Kaothien, Akiyoshi Kawaoka, Hiroyasu Ebinuma, Kazuya Yoshida, Atsuhiko Shinmyo

Abstract read
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In one paragraph

Article in Plant molecular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome-Wide Analysis ofInternational journal of molecular sciences · 2019
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Pulla KaothienGraduate School of Biological Science, Nara Institute of Science and Technology, Ikoma, Japan.
Akiyoshi Kawaoka
Hiroyasu Ebinuma
Kazuya Yoshida
Atsuhiko Shinmyo
Nara Institute of Science and Technology · JPNippon Paper Industries (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To understand molecular mechanisms underlying wound-induced expression of plant peroxidase genes, the promoter of a horseradish C2 peroxidase (prxC2) gene was analyzed. We had previously isolated a tobacco nuclear protein, Ntlim1, as a trans factor binding to a PAL-box motif of the prxC2 promoter; however, the function of the Ntlim1 trans factor and the PAL-box motif in wound-responsive expression of the prxC2 gene remains unclear. Here, we found that the prxC2 promoter without the intact PAL-box motif failed to direct a normal level of both the basal and the wound-induced expression of beta-glucuronidase (GUS) reporter gene in transgenic tobacco plants, indicating that the PAL-box motif functions as an essential cis element of the prxC2 promoter. We also found that antisense expression of Ntlim1 in transgenic plants carrying the prxC2 promoter::GUS chimeric construct decreased not only the level of the basal and the wound-induced expression of the GUS reporter gene but also the extent of wound inducibility of the prxC2 promoter itself. This result indicates that Ntlim1 is required for the basal level of prxC2 promoter activity as well as its up-regulation under wound stress. Moreover, consistent with the results obtained in planta, result from super-shift assay indicates that the Ntlim1 binds to the PAL-box motif independently of wound stress.

Indexed as

Plant ProteinsBase SequenceBinding SitesGene Expression Regulation, EnzymologicGlucuronidaseHorseradish PeroxidaseLIM Domain ProteinsNicotianaPlants, Genetically ModifiedPromoter Regions, GeneticProtein BindingRecombinant Fusion ProteinsStress, MechanicalTranscription FactorsGlucuronidaseHorseradish PeroxidaseLIM Domain ProteinsNtlim1 protein, Nicotiana tabacumPlant ProteinsRecombinant Fusion ProteinsTranscription Factors

Identifiers

PMID12081367
OpenAlexW73942573

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.