Evidence map›Paper›PMID 12065405›Full record

ArticleThe EMBO journal2002

Control of germination and lipid mobilization by COMATOSE, the Arabidopsis homologue of human ALDP.

Steven Footitt, Stephen P Slocombe, Victoria Larner, Smita Kurup, Yaosheng Wu, Tony Larson, Ian Graham, Alison Baker, Michael Holdsworth

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 136 papers.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed, 304 citations in OpenAlex.

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  11. Transcriptome-guided breeding for Paspalum notatum: producing apomictic hybrids with enhanced omega-3 content.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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  16. Inventory of ATP-binding cassette proteins in Lithospermum erythrorhizon as a model plant producing divergent secondary metabolites.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022
    Article
  17. New Insights into Evolution of the ABC Transporter Family inCurrent issues in molecular biology · 2022
    Article
  18. Review
  19. Overexpression of Peroxisome-LocalizedInternational journal of molecular sciences · 2022
    Article
  20. Article

76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Steven FootittIACR-Long Ashton Research Station, Department of Agricultural Sciences, University of Bristol, Long Ashton, Bristol BS41 9AF, UK.
Stephen P Slocombe
Victoria Larner
Smita Kurup
Yaosheng Wu
Tony Larson
Ian Graham
Alison Baker
Michael Holdsworth
University of Bristol · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Embryo dormancy in flowering plants is an important dispersal mechanism that promotes survival of the seed through time. The subsequent transition to germination is a critical control point regulating initiation of vegetative growth. Here we show that the Arabidopsis COMATOSE (CTS) locus is required for this transition, and acts, at least in part, by profoundly affecting the metabolism of stored lipids. CTS encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). Like X-ALD patients, cts mutant embryos and seedlings exhibit pleiotropic phenotypes associated with perturbation in fatty acid metabolism. CTS expression transiently increases shortly after imbibition during germination, but not in imbibed dormant seeds, and genetic analyses show that CTS is negatively regulated by loci that promote embryo dormancy through multiple independent pathways. Our results demonstrate that CTS regulates transport of acyl CoAs into the peroxisome, and indicate that regulation of CTS function is a major control point for the switch between the opposing developmental programmes of dormancy and germination.

Indexed as

Lipid MetabolismAcyl Coenzyme AAdrenoleukodystrophyArabidopsisArabidopsis ProteinsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily D, Member 1Genes, PlantGerminationHumansLipidsMolecular Sequence DataOxidation-ReductionPeroxisomesSeedsABCD1 protein, humanAcyl Coenzyme AArabidopsis ProteinsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily D, Member 1Lipids

Identifiers

PMID12065405
PMCPMC125387
OpenAlexW2031519432

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.