ArticleProceedings of the National Academy of Sciences of the United States of America2002
Intraspecific violation of genetic colinearity and its implications in maize.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 213 papers.
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Who cites it
213 citing papers in PubMed.
- Extensive genome evolution distinguishes maize within a stable tribe of grasses.bioRxiv : the preprint server for biology · 2025Article
- Transgressive hybrids as hopeful holobionts.Microbiome · 2025Article
- Pan-genomics: Insight into the Functional Genome, Applications, Advancements, and Challenges.Current genomics · 2025Review
- Technological Development and Advances for Constructing and Analyzing Plant Pangenomes.Genome biology and evolution · 2024Review
- Article
- Combined analysis of transposable elements and structural variation in maize genomes reveals genome contraction outpaces expansion.PLoS genetics · 2023Article
- Epigenetic Regulation in Heterosis and Environmental Stress: The Challenge of Producing Hybrid Epigenomes to Face Climate Change.Epigenomes · 2023Review
- Large haplotypes highlight a complex age structure within the maize pan-genome.Genome research · 2023Article
- COMPILE: a GWAS computational pipeline for gene discovery in complex genomes.BMC plant biology · 2022Article
- Review
- Whole-genome variation of transposable element insertions in a maize diversity panel.G3 (Bethesda, Md.) · 2021Article
- Stability of DNA methylation and chromatin accessibility in structurally diverse maize genomes.G3 (Bethesda, Md.) · 2021Article
- Enterobacter hormaechei (MF957335) enhanced yield, disease and salinity tolerance in tomato.Archives of microbiology · 2021Article
- Genomic resources in plant breeding for sustainable agriculture.Journal of plant physiology · 2021Review
- Discovery and Validation of a Recessively Inherited Major-Effect QTL Conferring Resistance to Maize Lethal Necrosis (MLN) Disease.Frontiers in genetics · 2021Article
- Insights into the molecular control of cross-incompatibility in Zea mays.Plant reproduction · 2020Review
- Miniature inverted-repeat transposable elements (MITEs), derived insertional polymorphism as a tool of marker systems for molecular plant breeding.Molecular biology reports · 2020Review
- Repetitive DNA content in the maize genome is uncoupled from population stratification at SNP loci.BMC genomics · 2020Article
- High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® axiom® array.BMC genomics · 2019Article
- Article
153 more citing papers are in PubMed but not listed here.
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Although allelic sequences can vary extensively, it is generally assumed that each gene in one individual will have an allelic counterpart in another individual of the same species. We report here that this assumption does not hold true in maize. We have sequenced over 100 kb from the bz genomic region of two different maize lines and have found dramatic differences between them. First, the retrotransposon clusters, which comprise most of the repetitive DNA in maize, differ markedly in make-up and location relative to the genes in the bz region. Second, and more importantly, the genes themselves differ between the two lines, demonstrating that genetic microcolinearity can be violated within the same species. Our finding has bearing on the underlying genetic basis of hybrid vigor in maize, and possibly other organisms, and on the measurement of genetic distances.
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