Evidence map›Paper›PMID 12060683›Full record

ArticleNucleic acids research2002

Changing homeodomain residues 2 and 3 of Hoxa1 alters its activity in a cell-type and enhancer dependent manner.

Sophie Remacle, Chloë Shaw-Jackson, Christelle Matis, Xavier Lampe, Jacques Picard, René Rezsöhazy

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Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Homeodomain Involvement in Nuclear HOX Protein Homo- and Heterodimerization.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sophie RemacleUnité de Génétique du Développement, UCL 7382, Université Catholique de Louvain, B-1200 Bruxelles, Belgium.
Chloë Shaw-Jackson
Christelle Matis
Xavier Lampe
Jacques Picard
René Rezsöhazy
UCLouvain · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The second and third amino acid residues of the N-terminal arm of most Hox protein homeodomains are basic (lysine or arginine), whereas they are asparagine and alanine, respectively, in the Hoxa1 homeodomain. Previous reports pinpointed these residues as specificity determinants in the function of Hoxa1 when it is acting as a monomer. However, in vitro data supported that these residues do not influence the target specificity of Hoxa1 in Pbx1a-Hoxa1 heterodimers. Here, we have analysed the transcriptional activity of a Hoxa1(NA-KR) mutant for which the asparagine and alanine residues of the homeodomain have been replaced by lysine and arginine, respectively. Comparison between the wild-type and mutant Hoxa1 reveals that they show distinct activity on the TSEII enhancer of the somatostatin gene, but that they are equally active in the presence of Pbx and Prep cofactors. This therefore corroborates the biochemical evidence having shown that the second and third residues of the homeodomain do not contribute to the DNA binding of Hoxa1-Pbx dimers. However, on the hoxb1 autoregulatory enhancer, Hoxa1 and Hoxa1(NA-KR) may display distinct activity despite the presence of Pbx, in a cell-type dependent manner. Therefore, our data suggest that, depending on the enhancer, these residues may contribute to the functional specificity of Hoxa1 and that this contribution may not be abrogated by the interaction with Pbx.

Indexed as

Enhancer Elements, GeneticAmino Acid SubstitutionAnimalsCell LineDNA-Binding ProteinsHerpes Simplex Virus Protein Vmw65Homeobox A1 ProteinHomeodomain ProteinsHumansPre-B-Cell Leukemia Transcription Factor 1Protein Structure, TertiaryProto-Oncogene ProteinsRecombinant Fusion ProteinsSomatostatinStructure-Activity RelationshipTrans-ActivatorsDNA-Binding ProteinsHerpes Simplex Virus Protein Vmw65Homeobox A1 ProteinHomeodomain ProteinsHOXB1 homeodomain proteinPBX1 protein, humanPKNOX1 protein, humanPre-B-Cell Leukemia Transcription Factor 1Proto-Oncogene ProteinsRecombinant Fusion ProteinsSomatostatinTrans-ActivatorsTranscription Factors

Identifiers

PMID12060683
PMCPMC117285
OpenAlexW2051392942

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.