Evidence map›Paper›PMID 12057937›Full record

ArticleJournal of bacteriology2002

Natural transformation and DNA uptake signal sequences in Actinobacillus actinomycetemcomitans.

Ying Wang, Steve D Goodman, Rosemary J Redfield, Casey Chen

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
6.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 113 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Frontiers in oral health · 2022
    Article
  10. Article
  11. Article
  12. Outer membrane vesicle-mediated serum protection inJournal of oral microbiology · 2020
    Article
  13. Whole Genome Sequencing ofPathogens (Basel, Switzerland) · 2019
    Article
  14. Virulence and Pathogenicity Properties ofPathogens (Basel, Switzerland) · 2019
    Review
  15. Large-scale identification of pathogen essential genes during coinfection with sympatric and allopatric microbes.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  16. Journal of oral microbiology · 2019
    Article
  17. Role of OmpA1 and OmpA2 inJournal of oral microbiology · 2019
    Article
  18. Article
  19. NPJ biofilms and microbiomes · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Ying WangUniversity of Southern California School of Dentistry, Los Angeles, California 90089, USA.
Steve D Goodman
Rosemary J Redfield
Casey Chen
University of Southern California · USUniversity of British Columbia · CA

Funding

Novel clone-specific virulence determinants of A. actinomycetemcomitansR01DE012212 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEN, CASEY · 1999 to 2016
$5.0M
NIDCR NIH HHS R01 DE012212NIDCR NIH HHS R01 DE12212
6 · The paper itself

Abstract

Actinobacillus actinomycetemcomitans is a member of the family Pasteurellaceae and a major causative agent of periodontitis. While several genera from this family are known to be competent for transformation, A. actinomycetemcomitans has yet to be fully characterized. Here we show that the competence of A. actinomycetemcomitans is remarkably similar to that of Haemophilus influenzae. In addition to having a similar frequency of transformation as H. influenzae, A. actinomycetemcomitans competence could also be induced at least 100-fold by cyclic AMP, suggesting that, as in H. influenzae, at least some competence genes are regulated by catabolite repression. Even more intriguing was the discovery of a putative A. actinomycetemcomitans DNA uptake signal sequence (USS) virtually identical to the USS of H. influenzae. Moreover, we provide evidence that this sequence functions in the same capacity as that from H. influenzae; the sequence appears to be required and sufficient for DNA uptake in a variety of assays. Finally, we have taken advantage of this system to develop a simple, highly efficient competence-based method for generating site-directed mutations in the wild-type fimbriated A. actinomycetemcomitans.

Indexed as

Transformation, BacterialAggregatibacter actinomycetemcomitansCyclic AMPDNAGene Transfer TechniquesHaemophilus influenzaePlasmidsCyclic AMPDNA

Identifiers

PMID12057937
PMCPMC135135
OpenAlexW2151033598

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.