Evidence map›Paper›PMID 12052869›Full record

ArticleMolecular and cellular biology2002

Two ras pathways in fission yeast are differentially regulated by two ras guanine nucleotide exchange factors.

Piyi Papadaki, Véronique Pizon, Brian Onken, Eric C Chang

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The Devastating Rice Blast Airborne PathogenPathogens (Basel, Switzerland) · 2023
    Review
  5. Pheromone Response and Mating Behavior in Fission Yeast.Microbiology and molecular biology reviews : MMBR · 2022
    Review
  6. Review
  7. Article
  8. Frontiers in microbiology · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. RasGRF Couples Nox4-Dependent Endoplasmic Reticulum Signaling to Ras.Arteriosclerosis, thrombosis, and vascular biology · 2017
    Article
  15. Article
  16. Review
  17. Review
  18. FYPO: the fission yeast phenotype ontology.Bioinformatics (Oxford, England) · 2013
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Piyi PapadakiBiology Department, New York University, New York, New York 10003-6688, USA.
Véronique Pizon
Brian Onken
Eric C Chang
New York University · USCentre National de la Recherche Scientifique · FR

Funding

REGULATION OF GENETIC STABILITY BY THE INT6 FAMILYR01CA090464 · NCI · NEW YORK UNIVERSITY · PI CHANG, ERIC C · 2002 to 2011
$2.5M
NCI NIH HHS CA90464NCI NIH HHS R01 CA090464
6 · The paper itself

Abstract

How a given Ras prreotein coordinates multiple signaling inputs and outputs is a fundamental issue of signaling specificity. Schizosaccharomyces pombe contains one Ras, Ras1, that has two distinct outputs. Ras1 activates Scd1, a presumptive guanine nucleotide exchange factor (GEF) for Cdc42, to control morphogenesis and chromosome segregation, and Byr2, a component of a mitogen-activated protein kinase cascade, to control mating. So far there is only one established Ras1 GEF, Ste6. Paradoxically, ste6 null (ste6 Delta) mutants are sterile but normal in cell morphology. This suggests that Ste6 specifically activates the Ras1-Byr2 pathway and that there is another GEF capable of activating the Scd1 pathway. We thereby characterized a potential GEF, Efc25. Genetic data place Efc25 upstream of the Ras1-Scd1, but not the Ras1-Byr2, pathway. Like ras1 Delta and scd1 Delta, efc25 Delta is synthetically lethal with a deletion in tea1, a critical element for cell polarity control. Using truncated proteins, we showed that the C-terminal GEF domain of Efc25 is essential for function and regulated by the N terminus. We conclude that Efc25 acts as a Ras1 GEF specific for the Scd1 pathway. While ste6 expression is induced during mating, efc25 expression is constitutive. Moreover, Efc25 overexpression renders cells hyperelongated and sterile; the latter can be rescued by activated Ras1. This suggests that Efc25 can recruit Ras1 to selectively activate Scd1 at the expense of Byr2. Reciprocally, Ste6 overexpression can block Scd1 activation. We propose that external signals can partly segregate two Ras1 pathways by modulating GEF expression and that GEFs can influence how Ras is coupled to specific effectors.

Indexed as

MAP Kinase Kinase KinasesSchizosaccharomyces pombe ProteinsATP-Binding Cassette TransportersCell Cycle ProteinsFungal ProteinsGene DeletionGuanine Nucleotide Exchange FactorsMitogen-Activated Protein KinasesProtein Structure, TertiaryProto-Oncogene Proteinsras ProteinsSchizosaccharomycesSignal TransductionATP-Binding Cassette TransportersBYR2 protein, S pombeCell Cycle ProteinsEfc25 protein, S pombeFungal ProteinsGuanine Nucleotide Exchange FactorsMAP Kinase Kinase KinasesMitogen-Activated Protein KinasesProto-Oncogene ProteinsRas1 protein, S pomberas Proteinsscd1 protein, S pombeSchizosaccharomyces pombe ProteinsSTE6 protein, S pombe

Identifiers

PMID12052869
PMCPMC133927
OpenAlexW1993407233

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.