Evidence map›Paper›PMID 12039746›Full record

ArticleApplied and environmental microbiology2002

Dothistroma pini, a forest pathogen, contains homologs of aflatoxin biosynthetic pathway genes.

Rosie E Bradshaw, Deepak Bhatnagar, Rebecca J Ganley, Carmel J Gillman, Brendon J Monahan, Janet M Seconi

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 49 citations in OpenAlex.

  1. Fungal Effectoromics: A World in Constant Evolution.International journal of molecular sciences · 2022
    Review
  2. Extracellular Vesicles fromJournal of fungi (Basel, Switzerland) · 2021
    Article
  3. Scientific Opinion on the risk to plant health posed byEFSA journal. European Food Safety Authority · 2013
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Biosynthesis of dothistromin.Mycopathologia · 2006
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Phylogenomic analysis of type I polyketide synthase genes in pathogenic and saprobic ascomycetes.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Rosie E BradshawInstitute of Molecular Biosciences, Massey University, Palmerston North, New Zealand. R.E.Bradshaw@massey.ac.nz
Deepak Bhatnagar
Rebecca J Ganley
Carmel J Gillman
Brendon J Monahan
Janet M Seconi
Massey University · NZSouthern Regional Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Homologs of aflatoxin biosynthetic genes have been identified in the pine needle pathogen Dothistroma pini. D. pini produces dothistromin, a difuranoanthraquinone toxin with structural similarity to the aflatoxin precursor versicolorin B. Previous studies with purified dothistromin suggest a possible role for this toxin in pathogenicity. By using an aflatoxin gene as a hybridization probe, a genomic D. pini clone was identified that contained four dot genes with similarity to genes in aflatoxin and sterigmatocystin gene clusters with predicted activities of a ketoreductase (dotA), oxidase (dotB), major facilitator superfamily transporter (dotC), and thioesterase (dotD). A D. pini dotA mutant was made by targeted gene replacement and shown to be severely impaired in dothistromin production, confirming that dotA is involved in dothistromin biosynthesis. Accumulation of versicolorin A (a precursor of aflatoxin) by the dotA mutant confirms that the dotA gene product is involved in an aflatoxin-like biosynthetic pathway. Since toxin genes have been found to be clustered in fungi in every case analyzed so far, it is speculated that the four dot genes may comprise part of a dothistromin biosynthetic gene cluster. A fifth gene, ddhA, is not a homolog of aflatoxin genes and could be at one end of the dothistromin cluster. These genes will allow comparative biochemical and genetic studies of the aflatoxin and dothistromin biosynthetic pathways and may also lead to new ways to control Dothistroma needle blight.

Indexed as

Bacterial ProteinsAflatoxinsAmino Acid SequenceAnthraquinonesBase SequenceCarbohydrate MetabolismCarrier ProteinsGenes, BacterialMembrane ProteinsMolecular Sequence DataMultigene FamilyMutationNitrogenPlant DiseasesProteobacteriaSequence Homology, Amino AcidAflatoxinsAnthraquinonesBacterial ProteinsCarrier ProteinsDotA protein, Legionella pneumophiladothistrominMembrane ProteinsNitrogen

Identifiers

PMID12039746
PMCPMC123981
OpenAlexW2165918424

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.