Evidence map›Paper›PMID 12037716›Full record

ArticleAmerican journal of human genetics2002

Meta-analysis of genetic-linkage analysis of quantitative-trait loci.

Carol J Etzel, Rudy Guerra

Abstract read
In one paragraph

Article in American journal of human genetics, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Meta-QTL analysis in wheat: progress, challenges and opportunities.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Carol J EtzelDepartment of Epidemiology, The University of Texas M. D. Anderson Cancer Center, Houston 77030, USA. cetzel@mdanderson.org
Rudy Guerra

Funding

R25 SUPPLEMENT IN GENETIC EPIDEMIOLOGY EDUCATIONR25CA057730 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CHANG, SHINE · 1992 to 2016
$18.6M
Positional Gene Identification of Complex TraitsR01ES009912 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AMOS, CHRISTOPHER I. · 1999 to 2006
$3.3M
LINKAGE METHODS FOR QUANTITATIVE AND COMPLEX TRAITSR01HG002275 · NHGRI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI AMOS, CHRISTOPHER I. · 2000 to 2002
$598k
STATISTICAL METHODS FOR GENE MAPPINGR01GM059506 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI SPEED, TERENCE PAUL · 1999 to 2001
$375k
NCI NIH HHS R25 CA057730NCI NIH HHS R25 CA57730NHGRI NIH HHS HG02275NHGRI NIH HHS R01 HG002275NIEHS NIH HHS ES09912NIEHS NIH HHS R01 ES009912NIGMS NIH HHS R01 GM59506
6 · The paper itself

Abstract

Meta-analysis is an important tool in linkage analysis. The pooling of results across primary linkage studies allows greater statistical power to detect quantitative-trait loci (QTLs) and more-precise estimation of their genetic effects and, hence, yields conclusions that are stronger relative to those of individual studies. Previous methods for the meta-analysis of linkage studies have been proposed, and, although some methods address the problem of between-study heterogeneity, most methods still require linkage analysis at the same marker or set of markers across studies, whereas others do not result in an estimate of genetic variance. In this study, we present a meta-analytic procedure to evaluate evidence from several studies that report Haseman-Elston statistics for linkage to a QTL at multiple, possibly distinct, markers on a chromosome. This technique accounts for between-study heterogeneity and estimates both the location of the QTL and the magnitude of the genetic effect more precisely than does an individual study. We also provide standard errors for the genetic effect and for the location (in cM) of the QTL, using a resampling method. The approach can be applied under other conditions, provided that the various studies use the same linkage statistic.

Indexed as

Genetic LinkageMeta-Analysis as TopicQuantitative Trait, HeritableComputer SimulationFemaleHumansMale

Identifiers

PMID12037716
PMCPMC384993

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.