Evidence map›Paper›PMID 12037049›Full record

ArticleJournal of clinical microbiology2002

Multilocus sequence typing scheme for Enterococcus faecium.

Wieger L Homan, David Tribe, Simone Poznanski, Mei Li, Geoff Hogg, Emile Spalburg, Jan D A Van Embden, Rob J L Willems

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 244 papers.

0numbers the graph read from it
0cells of the map it votes in
244citing papers in PubMed
9.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

244 citing papers in PubMed, 549 citations in OpenAlex.

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  18. Accurate identification ofJournal of medical microbiology · 2025
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  19. Isolation ofAntibiotics (Basel, Switzerland) · 2025
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184 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Wieger L HomanResearch Laboratory for Infectious Diseases, National Institute of Public Health and the Environment, Bilthoven, The Netherlands. wieger.homan@rivm.nl
David Tribe
Simone Poznanski
Mei Li
Geoff Hogg
Emile Spalburg
Jan D A Van Embden
Rob J L Willems
National Institute for Public Health and the Environment · NLThe University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A multilocus sequence typing (MLST) scheme has been developed for Enterococcus faecium. Internal fragments from seven housekeeping genes of 123 epidemiologically unlinked isolates from humans and livestock and 16 human-derived isolates from several outbreaks in the United States, the United Kingdom, Australia, and The Netherlands were analyzed. A total of 62 sequence types were detected in vancomycin-sensitive E. faecium (VSEF) and vancomycin-resistant E. faecium (VREF) isolates. VSEF isolates were genetically more diverse than VREF isolates. Both VSEF and VREF isolates clustered in host-specific lineages that were similar to the host-specific clustering obtained by amplified fragment length polymorphism analysis. Outbreak isolates from hospitalized humans clustered in a subgroup that was defined by the presence of a unique allele from the housekeeping gene purK and the surface protein gene esp. The MLST results suggest that epidemic lineages of E. faecium emerged recently worldwide, while genetic variation in both VREF and VSEF was created by longer-term recombination. The results show that MLST of E. faecium provides an excellent tool for isolate characterization and long-term epidemiologic analysis.

Indexed as

AllelesBase SequenceAnimalsAnti-Bacterial AgentsBacterial ProteinsBacterial Typing TechniquesEnterococcus faeciumGenetic VariationGram-Positive Bacterial InfectionsHumansMolecular Sequence DataRecombination, GeneticSequence Analysis, DNAVancomycinVancomycin ResistanceAnti-Bacterial AgentsBacterial ProteinsVancomycin

Identifiers

PMID12037049
PMCPMC130786
OpenAlexW2117737102

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.