Evidence map›Paper›PMID 12029048›Full record

ArticleJournal of bacteriology2002

Membrane topology of the multidrug transporter MdfA: complementary gene fusion studies reveal a nonessential C-terminal domain.

Julia Adler, Eitan Bibi

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Biochemistry of bacterial multidrug efflux pumps.International journal of molecular sciences · 2012
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Alkalitolerance: a biological function for a multidrug transporter in pH homeostasis.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  12. Article
  13. The Escherichia coli multidrug transporter MdfA catalyzes both electrogenic and electroneutral transport reactions.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Julia AdlerDepartment of Biological Chemistry, Weizmann Institute of Science, Rehovot 76100, Israel.
Eitan Bibi
Weizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hydrophobicity profile and sequence alignment of the Escherichia coli multidrug transporter MdfA indicate that it belongs to the 12-transmembrane-domain family of transporters. According to this prediction, MdfA contains a single membrane-embedded charged residue (Glu26), which was shown to play an important role in substrate recognition. To test the predicted secondary structure of MdfA, we analyzed complementary pairs of hybrids of MdfA-PhoA (alkaline phosphatase, functional in the periplasm) and MdfA-Cat (chloramphenicol acetyltransferase, functional in the cytoplasm), generated in all the putative cytoplasmic and periplasmic loops of MdfA. Our results support the 12-transmembrane topology model and the suggestion that except for Glu26, no other charged residues are present in the membrane domain of MdfA. Surprisingly, by testing the ability of the truncated MdfA-Cat and MdfA-PhoA hybrids to confer multidrug resistance, we demonstrate that the entire C-terminal transmembrane domain and the cytoplasmic C terminus are not essential for MdfA-mediated drug resistance and transport.

Indexed as

Drug Resistance, Multiple, BacterialEscherichia coli ProteinsMembrane Transport ProteinsAlkaline PhosphataseAmino Acid SequenceAnti-Bacterial AgentsBacterial ProteinsChloramphenicol O-AcetyltransferaseEscherichia coliMolecular Sequence DataProtein Structure, SecondaryRecombinant Fusion ProteinsAlkaline PhosphataseAnti-Bacterial AgentsBacterial ProteinsChloramphenicol O-AcetyltransferaseEscherichia coli ProteinsMdfa protein, E coliMembrane Transport ProteinsRecombinant Fusion Proteins

Identifiers

PMID12029048
PMCPMC135086
OpenAlexW2053200772

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.