Evidence map›Paper›PMID 12024048›Full record

ArticleMolecular and cellular biology2002

Yeast RAD26, a homolog of the human CSB gene, functions independently of nucleotide excision repair and base excision repair in promoting transcription through damaged bases.

Sung-Keun Lee, Sung-Lim Yu, Louise Prakash, Satya Prakash

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. The ARK2N-CK2 complex initiates transcription-coupled repair through enhancing the interaction of CSB with lesion-stalled RNAPII.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. DNA Repair in Haploid Context.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sung-Keun LeeSealy Center for Molecular Science, University of Texas Medical Branch, Galveston, Texas 77555-1061,USA.
Sung-Lim Yu
Louise Prakash
Satya Prakash

Funding

Repair of UV irradiated DNA: excision genes of yeastR37CA041261 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 2002 to 2011
$3.8M
Transcription-coupled DNA repair in yeastR01CA035035 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 1985 to 2008
$1.7M
EXCISION REPAIR OF UV IRRADIATED DNA IN YEASTR37CA035035 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 1993 to 2001
$682k
REPAIR OF UV IRRADIATED DNA: EXCISION GENES OF YEASTR01CA041261 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, SATYA · 1986 to 2000
$352k
NCI NIH HHS CA35035NCI NIH HHS CA41261NCI NIH HHS R01 CA035035NCI NIH HHS R01 CA041261NCI NIH HHS R37 CA035035NCI NIH HHS R37 CA041261
6 · The paper itself

Abstract

RAD26 in the yeast Saccharomyces cerevisiae is the counterpart of the human Cockayne syndrome group B (CSB) gene. Both RAD26 and CSB act in the preferential repair of UV lesions on the transcribed strand, and in this process, they function together with the components of nucleotide excision repair (NER). Here, we examine the role of RAD26 in the repair of DNA lesions induced upon treatment with the alkylating agent methyl methanesulfonate (MMS). MMS-induced DNA lesions include base damages such as 3-methyl adenine and 7-methyl guanine, and these lesions are removed in yeast by the alternate competing pathways of base excision repair (BER), which is initiated by the action of MAG1-encoded N-methyl purine DNA glycosylase, and NER. Interestingly, a synergistic increase in MMS sensitivity was observed in the rad26 Delta strain upon inactivation of NER or BER, indicating that RAD26 promotes the survival of MMS-treated cells by a mechanism that acts independently of either of these repair pathways. The galactose-inducible transcription of the GAL2, GAL7, and GAL10 genes is reduced in MMS-treated rad26 Delta cells and also in mag1 Delta rad14 Delta cells, whereas a very severe reduction in transcription occurs in MMS-treated mag1 Delta rad14 Delta rad26 Delta cells. From these observations, we infer that RAD26 plays a role in promoting transcription by RNA polymerase II through damaged bases. The implications of these observations are discussed in this paper.

Indexed as

Cell Cycle ProteinsSchizosaccharomyces pombe ProteinsTranscription, GeneticBase PairingDNA HelicasesDNA RepairDNA Repair EnzymesFungal ProteinsHumansMethyl MethanesulfonateMutagensPoly-ADP-Ribose Binding ProteinsYeastsCell Cycle ProteinsDNA HelicasesDNA Repair EnzymesERCC6 protein, humanFungal ProteinsMethyl MethanesulfonateMutagensPoly-ADP-Ribose Binding Proteinsrad26 protein, S pombeSchizosaccharomyces pombe Proteins

Identifiers

PMID12024048
PMCPMC133843

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.