Evidence map›Paper›PMID 12024017›Full record

ArticleMolecular and cellular biology2002

Components of the SAGA histone acetyltransferase complex are required for repressed transcription of ARG1 in rich medium.

Andrea R Ricci, Julie Genereaux, Christopher J Brandl

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. The Pseudokinase Domain ofG3 (Bethesda, Md.) · 2018
    Article
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  4. Review
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  8. Review
  9. Promoter regulation by distinct mechanisms of functional interplay between lysine acetylase Rtt109 and histone chaperone Asf1.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrea R RicciDepartment of Biochemistry, The University of Western Ontario, London, Ontario N6A 5C1, Canada.
Julie Genereaux
Christopher J Brandl
Western University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcriptional regulation of the Saccharomyces cerevisiae ARG1 gene is controlled by positive and negative elements. The transactivator Gcn4p is required for activation in minimal medium, while arginine repression requires the ArgR/Mcm1 regulatory complex, which binds to two upstream arginine control elements. We have found that the coordinated regulation of ARG1 requires components of the SAGA chromatin-remodeling complex. Using gcn5 deletion strains and a Gcn5 protein carrying the E173Q mutation in the histone acetyltransferase (HAT) region, we show that the HAT activity of Gcn5p is required for repression of ARG1 in rich medium. Similar increases in expression were seen upon deletion of other SAGA components but not upon deletion of the ADA-specific component, Ahc1p. Chromatin immunoprecipitations using antibodies to acetylated H3 confirmed that a decrease in the level of acetylated histones at the ARG1 promoter correlated with increased ARG1 expression. Up-regulation of ARG1 in the absence of Gcn5p also correlated with increased binding of TATA-binding protein to the promoter. The analysis of promoter deletions showed that Gcn5/Ada repression of ARG1 was mediated through the action of the ArgR/Mcm1 regulatory complex. In addition, studies with minimal medium demonstrated a requirement for the Ada proteins in activation of ARG1. This suggests that SAGA has a dual role at ARG1, acting to repress transcription in rich medium and activate transcription in minimal medium.

Indexed as

AcetyltransferasesArgininosuccinate SynthaseBacterial ProteinsBase SequenceCulture MediaDNA-Binding ProteinsFungal ProteinsGene Expression Regulation, FungalHistone AcetyltransferasesHistone DeacetylasesHistonesMinichromosome Maintenance 1 ProteinMolecular Sequence DataMutationp300-CBP-Associated FactorPromoter Regions, GeneticAcetyltransferasesArgininosuccinate SynthaseArgR protein, BacteriaBacterial ProteinsCulture MediaDNA-Binding ProteinsFungal ProteinsGCN5 protein, S cerevisiaeHistone AcetyltransferasesHistone DeacetylasesHistonesMinichromosome Maintenance 1 Proteinp300-CBP-Associated FactorProtein KinasesRepressor ProteinsRPD3 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSAGA protein, Emericella nidulansSIN3 protein, S cerevisiaeTATA-Box Binding ProteinTranscription Factors

Identifiers

PMID12024017
PMCPMC133849
OpenAlexW2070801275

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.