Evidence map›Paper›PMID 12023898›Full record

ArticleThe Biochemical journal2002

Increased actin polymerization reduces the inhibition of serum response factor activity by Yin Yang 1.

Peter D Ellis, Karen M Martin, Colin Rickman, James C Metcalfe, Paul R Kemp

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Rho/SRF Inhibitor Modulates Mitochondrial Functions.International journal of molecular sciences · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. The actin-MRTF-SRF gene regulatory axis and myofibroblast differentiation.Journal of cardiovascular translational research · 2012
    Review
  9. Yin yang 1 is a novel regulator of pulmonary fibrosis.American journal of respiratory and critical care medicine · 2011
    Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Peter D EllisSection of Cardiovascular Biology, Department of Biochemistry, University of Cambridge, Building O, Downing Site, Cambridge CB2 1QW, UK.
Karen M Martin
Colin Rickman
James C Metcalfe
Paul R Kemp
University of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent evidence has implicated CC(A/T(richG))GG (CArG) boxes, binding sites for serum response factor (SRF), in the regulation of expression of a number of genes in response to changes in the actin cytoskeleton. In many cases, the activity of SRF at CArG boxes is modulated by transcription factors binding to overlapping (e.g. Yin Yang 1, YY1) or adjacent (e.g. ets) binding sites. However, the mechanisms by which SRF activity is regulated by the cytoskeleton have not been determined. To investigate these mechanisms, we screened for cells that did or did not increase the activity of a fragment of the promoter for a smooth-muscle (SM)-specific gene SM22alpha, in response to changes in actin cytoskeletal polymerization induced by LIM kinase. These experiments showed that vascular SM cells (VSMCs) and C2C12 cells increased the activity of promoters containing at least one of the SM22alpha CArG boxes (CArG near) in response to LIM kinase, whereas P19 cells did not. Bandshift assays using a probe to CArG near showed that P19 cells lacked detectable YY1 DNA binding to the CArG box in contrast with the other two cell types. Expression of YY1 in P19 cells inhibited SM22alpha promoter activity and conferred responsiveness to LIM kinase. Mutation of the CArG box to inhibit YY1 or SRF binding indicated that both factors were required for the LIM kinase response in VSMCs and C2C12 cells. The data indicate that changes in the actin cytoskeletal organization modify SRF activity at CArG boxes by modulating YY1-dependent inhibition.

Indexed as

DepsipeptidesActinsBase SequenceBinding SitesBiopolymersCell LineDNA-Binding ProteinsDNA PrimersElectrophoretic Mobility Shift AssayErythroid-Specific DNA-Binding FactorsLim KinasesMicrofilament ProteinsMuscle ProteinsPeptides, CyclicPromoter Regions, GeneticProtein KinasesActinsBiopolymersDepsipeptidesDNA-Binding ProteinsDNA PrimersErythroid-Specific DNA-Binding FactorsjasplakinolideLimk1 protein, mouseLim KinasesMicrofilament ProteinsMuscle ProteinsPeptides, CyclicProtein KinasesSerum Response FactorTagln protein, mouseTranscription FactorstransgelinYY1 Transcription Factor

Identifiers

PMID12023898
PMCPMC1222600
OpenAlexW2150407486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.