Evidence map›Paper›PMID 12023298›Full record

ArticleGenes & development2002

Xic1 degradation in Xenopus egg extracts is coupled to initiation of DNA replication.

Zhongsheng You, Kevin Harvey, Lindsay Kong, John Newport

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. MYC and the control of DNA replication.Cold Spring Harbor perspectives in medicine · 2014
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. The Xenopus cell cycle: an overview.Molecular biotechnology · 2008
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Zhongsheng YouDivision of Biology, University of California, San Diego, La Jolla, California 92093-0349, USA.
Kevin Harvey
Lindsay Kong
John Newport
University of California, San Diego · US

Funding

BIOCHEM PATHWAYS LINKING DNA REPLICATION &MITOSISR01GM044656 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI NEWPORT, JOHN W · 1991 to 2002
$701k
NIGMS NIH HHS GM44656
6 · The paper itself

Abstract

CDK2 activity is regulated by phosphorylation/dephosphorylation, subcellular localization, cyclin levels, and cyclin dependent kinase inhibitors (CKIs). Using Xenopus egg extracts, we find that degradation of Xic1, a Xenopus p21(cip1)/p27(kip1) family member, is coupled to initiation of DNA replication. Xic1 turnover requires the formation of a prereplication complex (pre-RC). Additionally, downstream initiation factors including CDK2, Cdc7, and Cdc45, but not RPA or DNA polymerase alpha, are necessary for activating the degradation system. Xic1 degradation is attenuated following completion of DNA replication. Unlike degradation of p27(kip1) in mammalian cells, CDK2 activity is not directly involved in Xic1 degradation and interactions between Xic1 and CDK2/cyclin E are dispensable for Xic1 turnover. Interestingly, a C-terminal region (162-192) of Xic1 is essential and apparently sufficient for triggering Xic1 ubiquitination prior to degradation. These observations demonstrate that a direct link exists between DNA replication and CKI degradation.

Indexed as

Xenopus ProteinsAnimalsCell Cycle ProteinsChromatinCyclin-Dependent Kinase Inhibitor p27Cyclin-Dependent KinasesDNA-Binding ProteinsDNA Polymerase IDNA ReplicationEmbryo, NonmammalianEnzyme InhibitorsFemaleLigasesMaleMinichromosome Maintenance Complex Component 7Mutagenesis, Site-DirectedCell Cycle ProteinsChromatinCyclin-Dependent Kinase Inhibitor p27Cyclin-Dependent KinasesDNA-Binding ProteinsDNA Polymerase IEnzyme InhibitorsLigasesMcm7 protein, XenopusMinichromosome Maintenance Complex Component 7Nuclear ProteinsRecombinant ProteinsReplication Protein ATumor Suppressor ProteinsUbiquitinsXenopus ProteinsXicl protein, Xenopus

Identifiers

PMID12023298
PMCPMC186278
OpenAlexW2159258787

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.