Evidence map›Paper›PMID 12021361›Full record

ArticleJournal of virology2002

Increased CCR5 affinity and reduced CCR5/CD4 dependence of a neurovirulent primary human immunodeficiency virus type 1 isolate.

Paul R Gorry, Joann Taylor, Geoffrey H Holm, Andrew Mehle, Tom Morgan, Mark Cayabyab, Michael Farzan, Hui Wang, Jeanne E Bell, Kevin Kunstman and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 141 papers.

0numbers the graph read from it
0cells of the map it votes in
141citing papers in PubMed
4.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

141 citing papers in PubMed, 216 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Animal models for studies of HIV-1 brain reservoirs.Journal of leukocyte biology · 2022
    Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Nanoparticles presenting clusters of CD4 expose a universal vulnerability of HIV-1 by mimicking target cells.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. CROI 2019: neurologic complications of HIV disease.Topics in antiviral medicine · 2019
    Review
  18. Article
  19. Article
  20. Article

81 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Paul R GorryDepartment of Cancer Immunology and AIDS, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Joann Taylor
Geoffrey H Holm
Andrew Mehle
Tom Morgan
Mark Cayabyab
Michael Farzan
Hui Wang
Jeanne E Bell
Kevin Kunstman
John P Moore
Steven M Wolinsky
Dana Gabuzda
Dana-Farber Cancer Institute · USNorthwestern University · USCornell University · USHarvard University · USUniversity of Edinburgh · GB

Funding

MULTICENTER AIDS COHORT STUDYU01AI035039 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WOLINSKY, STEVEN M · 1993 to 2018
$66.4M
SECOND RECEPTORS FOR PRIMATE IMMUNODEFICIENCY VIRUSESR01AI041420 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI MOORE, JOHN P · 1997 to 2015
$7.3M
DFCI-BIDMC-CH CENTER FOR AIDS RESEARCHP30AI028691 · NIAID · DANA-FARBER CANCER INSTITUTE · PI SODROSKI, JOSEPH G · 1989 to 2003
$6.2M
GREAT LAKES REGIONAL CENTER FOR AIDS RESEARCHP30CA079458 · NCI · NORTHWESTERN UNIVERSITY · PI WOLINSKY, STEVEN M · 1998 to 2002
$3.7M
CHEMOKINE RECEPTORS IN HIV1 INFECTION OF THE CNSR01NS037277 · NINDS · DANA-FARBER CANCER INSTITUTE · PI GABUZDA, DANA H. · 1998 to 2006
$2.9M
ROLE OF APOPTOSIS IN HIV-1 DEMENTIAR01NS035734 · NINDS · DANA-FARBER CANCER INSTITUTE · PI GABUZDA, DANA H. · 1996 to 2003
$1.4M
DRUG RELATED CNS DAMAGE-SYNERGY WITH EFFECTS OF HIVR01DA013127 · NIDA · UNIVERSITY OF EDINBURGH · PI BELL, JEANNE E · 2000 to 2002
$300k
NCI NIH HHS CA79458NIAID NIH HHS AI28691NIAID NIH HHS AI41420NIAID NIH HHS P30 AI028691NIAID NIH HHS R01 AI041420NIAID NIH HHS U01 AI035039NIAID NIH HHS U01 AI35039NIDA NIH HHS DA13127NINDS NIH HHS NS35734NINDS NIH HHS NS37277NINDS NIH HHS R01 NS035734NINDS NIH HHS R01 NS037277
6 · The paper itself

Abstract

Most human immunodeficiency virus type 1 (HIV-1) viruses in the brain use CCR5 as the principal coreceptor for entry into a cell. However, additional phenotypic characteristics are necessary for HIV-1 neurotropism. Furthermore, neurotropic strains are not necessarily neurovirulent. To better understand the determinants of HIV-1 neurovirulence, we isolated viruses from brain tissue samples from three AIDS patients with dementia and HIV-1 encephalitis and analyzed their ability to induce syncytia in monocyte-derived macrophages (MDM) and neuronal apoptosis in primary brain cultures. Two R5X4 viruses (MACS1-br and MACS1-spln) were highly fusogenic in MDM and induced neuronal apoptosis. The R5 viruses UK1-br and MACS2-br are both neurotropic. However, only UK1-br induced high levels of fusion in MDM and neuronal apoptosis. Full-length Env clones from UK1-br required lower CCR5 and CD4 levels than Env clones from MACS2-br to function efficiently in cell-to-cell fusion and single-round infection assays. UK1-br Envs also had a greater affinity for CCR5 than MACS2-br Envs in binding assays. Relatively high levels of UK1-br and MACS2-br Envs bound to CCR5 in the absence of soluble CD4. However, these Envs could not mediate CD4-independent infection, and MACS2-br Envs were unable to mediate fusion or infection in cells expressing low levels of CD4. The UK1-br virus was more resistant than MACS2-br to inhibition by the CCR5-targeted inhibitors TAK-779 and Sch-C. UK1-br was more sensitive than MACS2-br to neutralization by monoclonal antibodies (2F5 and immunoglobulin G1b12 [IgG1b12]) and CD4-IgG2. These results predict the presence of HIV-1 variants with increased CCR5 affinity and reduced dependence on CCR5 and CD4 in the brains of some AIDS patients with central nervous system disease and suggest that R5 variants with increased CCR5 affinity may represent a pathogenic viral phenotype contributing to the neurodegenerative manifestations of AIDS.

Indexed as

AIDS Dementia ComplexAmino Acid SequenceBrainCD4 AntigensEncephalitis, ViralGiant CellsHIV-1HIV Envelope Protein gp160HumansMacrophagesMolecular Sequence DataMonocytesNeuronsOrgan Culture TechniquesReceptors, CCR5VirulenceCD4 AntigensHIV Envelope Protein gp160Receptors, CCR5

Identifiers

PMID12021361
PMCPMC136234
OpenAlexW2146426059

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.