Evidence map›Paper›PMID 12011451›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Positive selection of self-MHC-reactive T cells by individual peptide-MHC class II complexes.

Gregory M Barton, Courtney Beers, Paul deRoos, Susan R Eastman, Marcela E Gomez, Katherine A Forbush, Alexander Y Rudensky

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Gregory M BartonMolecular and Cellular Biology Program, Department of Immunology, University of Washington School of Medicine, Seattle, WA 98195, USA.
Courtney Beers
Paul deRoos
Susan R Eastman
Marcela E Gomez
Katherine A Forbush
Alexander Y Rudensky
Howard Hughes Medical Institute · USUniversity of Washington · US

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
SELF PEPTIDES BOUND TO MHC CLASS II IN T CELL SELECTIONR01AI034206 · NIAID · UNIVERSITY OF WASHINGTON · PI Alexander Y Rudensky · 1998 to 2026
$6.4M
Self Peptides Bound to MHC Class II In T Cell SelectionR37AI034206 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI RUDENSKY, ALEXANDER Y · 2009 to 2018
$4.8M
SELF PEPTIDES ASSOCIATED WITH MHC CLASS IIR29AI034206 · NIAID · UNIVERSITY OF WASHINGTON · PI RUDENSKY, ALEXANDER Y. · 1992 to 1996
–
NIAID NIH HHS AI34206NIAID NIH HHS R01 AI034206NIAID NIH HHS R37 AI034206NIGMS NIH HHS T32 GM007270NIGMS NIH HHS T32 GM07270
6 · The paper itself

Abstract

If T cells require specific interactions with MHC-bound peptides during positive selection, then the specificities of T cells selected by one peptide should be distinct from those selected by another. We have examined positive selection of CD4 T cells in four strains of mice, each overexpressing a different peptide-1-A(b)(A(b)) complex. We show that a subset of CD4 T cells is selected by the overexpressed peptide and that the specificities of the CD4 T cells, as measured by reactivity to wild-type antigen-presenting cells, vary greatly depending on which peptide is overexpressed. These differences in specificity are mediated through positive selection not negative selection. Each of the four peptide-A(b) complexes appears to adopt a different conformation, and these differences correlate with the differences in reactivity. Our results suggest that individual peptide-MHC complexes positively select different subsets of self-MHC-reactive T cells and that the conformation of the peptide-MHC complex may contribute to this process.

Indexed as

Cell Adhesion MoleculesLectinsAmino Acid SequenceAnimalsAntigen PresentationAntigens, CDAntigens, Differentiation, B-LymphocyteAutoantigensCD4-Positive T-LymphocytesHistocompatibility Antigens Class IIHumansMiceMice, Inbred BALB CMice, Inbred C57BLMice, TransgenicMolecular Sequence DataAntigens, CDAntigens, Differentiation, B-LymphocyteAutoantigensCD22 protein, humanCd22 protein, mouseCell Adhesion MoleculesHistocompatibility Antigens Class IIinvariant chainLectinsPeptidesrab5 GTP-Binding ProteinsSialic Acid Binding Ig-like Lectin 2

Identifiers

PMID12011451
PMCPMC124507
OpenAlexW2069093290

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.