Evidence map›Paper›PMID 12010980›Full record

ArticleInfection and immunity2002

Regulation of the overlapping pic/set locus in Shigella flexneri and enteroaggregative Escherichia coli.

Martin Behrens, Jalaluddin Sheikh, James P Nataro

Abstract read
In one paragraph

Article in Infection and immunity, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
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  5. Review
  6. Article
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  9. Article
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  11. Article
  12. Article
  13. Review
  14. Progress and pitfalls in Shigella vaccine research.Nature reviews. Gastroenterology & hepatology · 2013
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Martin BehrensCenter for Vaccine Development, Department of Pediatrics, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
Jalaluddin Sheikh
James P Nataro

Funding

Virulence in Enteroaggregative Escherichia coliR01AI033096 · NIAID · UNIVERSITY OF VIRGINIA · PI NATARO, JAMES P. · 1996 to 2014
$6.6M
AUTOTRANSPORTERS OF ENTEROBACTERIACEAER01AI043615 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI NATARO, JAMES P. · 1999 to 2003
$1.4M
Autotransporters of enterobacteriaceaeR56AI043615 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI NATARO, JAMES P. · 2008 to 2008
$418k
ADHERENCE IN ENTEROAGGREGATIVE E. COLIR29AI033096 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI NATARO, JAMES P. · 1992 to 1996
–
NIAID NIH HHS AI33096NIAID NIH HHS AI43615NIAID NIH HHS R01 AI033096NIAID NIH HHS R01 AI043615NIAID NIH HHS R56 AI043615
6 · The paper itself

Abstract

Most strains of Shigella flexneri 2a and enteroaggregative Escherichia coli carry a highly conserved chromosomal locus which encodes a 109-kDa secreted mucinase (called Pic) and, on the opposite strand in overlapping fashion, an oligomeric enterotoxin called ShET1, encoded by the setA and setB genes. Here, we characterize the genetic regulation of these overlapping genes. Our data suggest that pic and the setBA loci are transcribed as complementary 4-kb mRNA species. The major pic promoter is maximally activated at 37 degrees C in exponential growth phase. Our data suggest that the setB gene is transcribed from a promoter which lies more than 1.5 kb upstream of the setB structural gene; setA may be transcribed via readthrough of the setB transcript and possibly by its own promoter. The long leader of the setB gene provides a strong silencing effect on setB transcription. The signals which provide relief from setB silencing are not clear, but significant induction is observed in a continuous anaerobic culture of human fecal bacteria, suggesting that some complex characteristics of the human intestine act to lift repression of setB expression. Our studies provide the first insights into the mechanisms affecting expression of this unusual virulence locus.

Indexed as

Gene Expression Regulation, BacterialGene Expression Regulation, EnzymologicGenes, BacterialGenes, OverlappingColonCulture TechniquesEnterotoxinsEscherichia coliGene SilencingHumansIntestinal MucosaPolysaccharide-LyasesSerine EndopeptidasesShiga ToxinShigella flexneriTranscription, GeneticEnterotoxinshyaluronate lyasePolysaccharide-LyasesSerine EndopeptidasesShiga Toxin

Identifiers

PMID12010980
PMCPMC127977

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.