Evidence map›Paper›PMID 12000843›Full record

ArticleNucleic acids research2002

Identification of delta helicase as the bovine homolog of HUPF1: demonstration of an interaction with the third subunit of DNA polymerase delta.

L Michael Carastro, Cheng-Keat Tan, Manuel Selg, Hans-Martin Jack, Antero G So, Kathleen M Downey

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

L Michael CarastroDepartment of Biochemistry and Molecular Biology, University of Miami School of Medicine, Miami, FL 33101, USA.
Cheng-Keat Tan
Manuel Selg
Hans-Martin Jack
Antero G So
Kathleen M Downey
University of Miami · US

Funding

FIDELITY OF DNA SYNTHESIS IN HEMATOPOETIC TISSUESR01DK026206 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI SO, ANTERO G · 1986 to 2001
$851k
NIDDK NIH HHS DK26206
6 · The paper itself

Abstract

Delta helicase is a 5' to 3' DNA helicase that partially co-purifies with DNA polymerase delta (pol delta) from fetal bovine thymus tissue. We describe the resolution of delta helicase from pol delta on heparin-agarose chromatography and its purification to apparent homogeneity by affinity purification on single-stranded DNA-cellulose chromatography, unique-sequence RNA-agarose chromatography, and ceramic hydroxyapatite chromatography. Delta helicase isolated from fetal bovine thymus had an apparent M(r) of 115 kDa in SDS-PAGE, and photo-crosslinked to [alpha-32P]ATP. Tandem mass spectrometry peptide mass data derived from the bovine polypeptide matched to human UPF1 (HUPF1), a 5' to 3' RNA and DNA helicase, and a requisite component of the mRNA surveillance complex. Antisera against HUPF1 cross-reacted with delta helicase on western analysis, and delta helicase activity was immunoinactivated by pre-incubation with antibodies to HUPF1, suggesting that delta helicase is the bovine homolog of HUPF1. Immunoprecipitation experiments demonstrated that HUPF1 interacts with the 66-kDa third subunit of pol delta in vivo.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceAnimalsBlotting, WesternCattleChromatographyDNA HelicasesDNA Polymerase IIIHeLa CellsHeterogeneous-Nuclear RibonucleoproteinsHumansMass SpectrometryMolecular Sequence DataPrecipitin TestsProtein BindingProtein SubunitsAdenosine TriphosphatasesDNA HelicasesDNA Polymerase IIIHeterogeneous-Nuclear RibonucleoproteinsProtein SubunitsRibonucleoproteinsRNA HelicasesTrans-ActivatorsUPF1 protein, human

Identifiers

PMID12000843
PMCPMC115286
OpenAlexW2135047771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.