Evidence map›Paper›PMID 11999376›Full record

ArticlePlant molecular biology2002

Comparative analysis of the plant mRNA-destabilizing element, DST, in mammalian and tobacco cells.

M Feldbrügge, P Arizti, M L Sullivan, P D Zamore, J G Belasco, P J Green

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Expression and functional analysis ofFrontiers in plant science · 2022
    Article
  2. Article
  3. Review
  4. Article
  5. Article
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  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

M FeldbrüggeMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing 48824-1312, USA.
P Arizti
M L Sullivan
P D Zamore
J G Belasco
P J Green

Funding

GENETIC ANALYSIS OF RNA BINDING PROTEINSR01GM055624 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BELASCO, JOEL G. · 1997 to 2005
$1.9M
NIGMS NIH HHS GM55624
6 · The paper itself

Abstract

The labile SAUR transcripts from higher plants contain a conserved DST sequence in their 3'-untranslated regions. Two copies of a DST sequence from soybean are sufficient to destabilize reporter transcripts in cultured tobacco cells whereas variants bearing mutations in the conserved ATAGAT or GTA regions are inactive. To investigate the potential for conserved recognition components in mammalian and plant cells, we examined the function of this instability determinant in mouse NIH3T3 fibroblasts and tobacco BY2 cells. In fibroblasts, a tetrameric DST element from soybean accelerated deadenylation and decay of a reporter transcript. However, a version mutated in the ATAGAT region was equally effective in this regard, and a tetrameric DST element from Arabidopsis was inactive. In contrast, the soybean DST element was more active as an mRNA instability element than the mutant version and the Arabidopsis element, when tested as tetramers in tobacco cells. Hence, the plant DST element is not recognized in animal cells with the same sequence requirements as in plant cells. Therefore, its mode of recognition appears to be plant-specific.

Indexed as

3T3 CellsAnimalsArabidopsisBase SequenceGlycine maxMiceMolecular Sequence DataNicotianaPlant CellsPlantsPoly ARegulatory Sequences, Nucleic AcidRNA, MessengerRNA StabilityPoly ARNA, Messenger

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.