Evidence map›Paper›PMID 11992260›Full record

ArticleAmerican journal of human genetics2002

A comprehensive mutation analysis of RP2 and RPGR in a North American cohort of families with X-linked retinitis pigmentosa.

Debra K Breuer, Beverly M Yashar, Elena Filippova, Suja Hiriyanna, Robert H Lyons, Alan J Mears, Bersabell Asaye, Ceren Acar, Raf Vervoort, Alan F Wright and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 245 citations in OpenAlex.

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  6. Genetics and diagnostics of inherited retinal diseases in the era of whole genome sequencing.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2025
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78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 3 countries.

Debra K BreuerDepartment of Human Genetics, W.K. Kellogg Eye Center, University of Michigan, 1000 Wall Street, Ann Arbor, MI 48105, USA.
Beverly M Yashar
Elena Filippova
Suja Hiriyanna
Robert H Lyons
Alan J Mears
Bersabell Asaye
Ceren Acar
Raf Vervoort
Alan F Wright
Maria A Musarella
Patricia Wheeler
Ian MacDonald
Alessandro Iannaccone
David Birch
Dennis R Hoffman
Gerald A Fishman
John R Heckenlively
Samuel G Jacobson
Paul A Sieving
Anand Swaroop
University of Michigan–Ann Arbor · USRetina Foundation of the Southwest · USDoheny Eye Institute · USMRC Human Genetics UnitNational Eye Institute · USSUNY Downstate Health Sciences University · USTufts Medical Center · USUniversity of Alberta · CAUniversity of Illinois Chicago · USUniversity of Pennsylvania · USUniversity of Tennessee Health Science Center · USWestern General Hospital · GB

Funding

VIVARIUM MODULEP30EY007003 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David Antonetti · 1987 to 2026
$17.6M
X-LINKED RETINITIS PIGMENTOSAR01EY007961 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KHANNA, HEMANT · 1994 to 2009
$4.3M
RETINAL PATHOPHYSIOLOGY OF INFANTS AND ADULTSR01EY005235 · NEI · RETINA FOUNDATION OF THE SOUTHWEST · PI BIRCH, DAVID G · 1985 to 2005
$1.6M
E75 IN THE DEVELOPING DROSOPHILA EYEF31EY007003 · NEI · YALE UNIVERSITY · PI SHILTON, ALYCIA N · 1999 to 2001
$14k
X-LINKED OCULAR ALBINISM &RETINITIS PIGMENTOSAR29EY007961 · NEI · YALE UNIVERSITY · PI SWAROOP, ANAND · 1989 to 1993
–
NEI NIH HHS EY 05235NEI NIH HHS EY 05627NEI NIH HHS EY 07003NEI NIH HHS EY 07961NEI NIH HHS F31 EY007003NEI NIH HHS P30 EY007003NEI NIH HHS R01 EY005235NEI NIH HHS R01 EY007961
6 · The paper itself

Abstract

X-linked retinitis pigmentosa (XLRP) is a clinically and genetically heterogeneous degenerative disease of the retina. At least five loci have been mapped for XLRP; of these, RP2 and RP3 account for 10%-20% and 70%-90% of genetically identifiable disease, respectively. However, mutations in the respective genes, RP2 and RPGR, were detected in only 10% and 20% of families with XLRP. Mutations in an alternatively spliced RPGR exon, ORF15, have recently been shown to account for 60% of XLRP in a European cohort of 47 families. We have performed, in a North American cohort of 234 families with RP, a comprehensive screen of the RP2 and RPGR (including ORF15) genes and their 5' upstream regions. Of these families, 91 (39%) show definitive X-linked inheritance, an additional 88 (38%) reveal a pattern consistent with X-linked disease, and the remaining 55 (23%) are simplex male patients with RP who had an early onset and/or severe disease. In agreement with the previous studies, we show that mutations in the RP2 gene and in the original 19 RPGR exons are detected in <10% and approximately 20% of XLRP probands, respectively. Our studies have revealed RPGR-ORF15 mutations in an additional 30% of 91 well-documented families with X-linked recessive inheritance and in 22% of the total 234 probands analyzed. We suggest that mutations in an as-yet-uncharacterized RPGR exon(s), intronic changes, or another gene in the region might be responsible for the disease in the remainder of this North American cohort. We also discuss the implications of our studies for genetic diagnosis, genotype-phenotype correlations, and gene-based therapy.

Indexed as

Eye ProteinsCarrier ProteinsCohort StudiesDNA Mutational AnalysisExonsGenetic LinkageGenetic VariationGenotypeGTP-Binding ProteinsHumansIntracellular Signaling Peptides and ProteinsMaleMembrane ProteinsMutationNorth AmericaOpen Reading FramesCarrier ProteinsEye ProteinsGTP-Binding ProteinsIntracellular Signaling Peptides and ProteinsMembrane ProteinsProteinsRP2 protein, humanRPGR protein, human

Identifiers

PMID11992260
PMCPMC379141
OpenAlexW2161723666

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.